To explore the origins of the Lake Malawi radiation in greater detail, we obtained 24 additionalAstatotilapiawhole-genome sequences from outside Lake Malawi: fiveA. callipterafrom Indian Ocean catchments, thus covering most of its geographical distribution, and 19 individuals from seven otherAstato...
Inference of human population history from individual whole-genome sequences. Nature 475, 493–496 (2011). Article CAS Google Scholar Wang, J. On the taxonomic status of species, geological distribution and evolutionary history of Ailuropoda. Acta Zool. Sinica 20, 191–201 (1974). Google ...
The genome sequences of 36 inbred laboratory mice were downloaded from the Sanger Institute website [24] and include 29 classical inbred strains and 7 wild-derived inbred strains (Additional file 1: Fig. S1 and Table S2). The whole-genome resequencing data was generated for the samples from ...
The results of the genetic differentiation for the different chicken breeds are showed in Table S5. The pairwise Fst values ranged from 0.01 (PD-WN) to 0.18 (YS-SHXY). Moreover, the gene flow (Nm) among all the breeds in the present study ranged from 1.16 between PD and WN to 24.23...
Inferring Demography from Runs of Homozygosity in Whole-Genome Sequence, with Correction for Sequence Errors both for our method and the Li and Durbin (Inference of human population history from individual whole-genome sequences. Nature 475:493-496) pairwise se... MacLeod Iona M.,DM Larkin,HA...
RA Power,S Davaniah,A Derache,E Wilkinson,TD Oliveira 摘要: Genome-wide association studies (GWAS) have considerably advanced our understanding of human traits and diseases. With the increasing availability of whole genome sequences (WGS) for pathogens, it is important to establish whether GWAS ...
Evidence based on genomic sequences is urgently needed to confirm the phylogenetic relationship between Mesorhizobium strain MAFF303099 and M. huakuii. To define underlying causes for the rather striking difference in host specificity between M. huakuii
calculation (Supplementary Figs. 2and3). Owing to the lack of marker resolution, we ordered the W scaffolds in a pseudo-W chromosome on the basis of their synteny with the Z chromosome. We derived autosome sequences from the female whole-genome sequence after subtraction of the putative W ...
discovery and also develop a framework to understand why a specific individual might have an extreme lipid value. Toward these two goals, we studied the whole-genome sequences in 16,324 participants of European, African, East Asian, and Hispanic ancestries with available plasma lipids phenotypes....
Lampreys are representatives of an ancient vertebrate lineage that diverged from our own similar to 500 million years ago. By virtue of this deeply shared ... JJ Smith,S Kuraku,C Holt,... - 《Nature Genetics》 被引量: 562发表: 2013年 Creating a honey bee consensus gene set We wished ...