SRA数据库, 为SequenceReadArchive的缩写。主要存储高通量测序的原始数据,来自四个测序平台,分别为:Roche_LS454,Illumina,ABI_SOLID和...,我们需要下载安装,下载地址:https://trace.ncbi.nlm.nih.gov/Traces/sra/sra.cgi?view=software 。 原始数据上传 NCBI最新攻略(扩曾子) ...
Illumina sequencing datasets generated in this study are available on the NCBI Sequence Read Archive, BioProject PRJNA778877 (ref. 107).Code availability The computational approach is described in detail in the Methods. Publicly available RefSeq and GenBank genomes were analyzed using published tools ...
All data are available from the corresponding author (S.H.) on reasonable request. The sequencing raw data were deposited in the NCBI Sequence Read Archive (SRA) under the BioProject PRJNA700531.Source dataare provided with this paper.
The R108 RNA-Seq data are available in the NCBI sequence read archive (SRA), under BioProject accession number SRP077692.Author information Author notes Authors and Affiliations National Center for Genome Resources, 2935 Rodeo Park Drive East, Santa Fe, NM, 87505, USA Karen M. Moll, Thiruva...
1A and B). The raw data generated for this study have been deposited at the NCBI Sequence Read Archive (SRA-NCBI; https://www.ncbi.nlm.nih.gov/sra) under Project accession number PRJNA773228 and BioSample accession numbers SAMN22451803-SAMN22451820. Download: Download high-res image (162KB...
Short-read datasets were downloaded from the NCBI Sequence Read Archive [43] and the corresponding complete genome sequences were obtained from the NCBI RefSeq database [44]. For this analysis, the smallest genome size was that of phiX174 (5,386 bp) and the largest was Niastella koreensis ...
fastq files can be found under thetest folder. Please note these fastqs are only for testing purposes. For the full fastqs used in our paper, please download the data from the NCBI Sequence Read Archive (SRA;https://www.ncbi.nlm.nih.gov/sra/) under access numbers SRP140497 and SRP...
MINT-Universal cDNA synthesis kit (Evrogen) following the manufacturer’s protocol. Sequencing was carried out using the Roche 454 GS FLX Titanium system. The raw data files are available in the Sequence read archive at the National Center for Biotechnology Information (NCBI), GenBank ID: SRA...
the NCBI database Sequence Read Archive (SRA) and the SRR numbers were from SRR10872161 to SRR10872172. Specifically, the 5′ and 3′ adaptor sequences were successively ligated to the aforementioned RNA fragments with T4 RNA ligase 2 [87]. The resulting RNA was reverse transcribed to cDNA ...
The publicly available sequence data files of four human OA meniscus samples and four healthy meniscus samples from GSE185064 were downloaded from the Sequence Read Archive (SRA) (https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE185064) [44]. SRA Run files were converted to fastq form...