如何撰写研究文章的介绍 | How to write an introduction of a research article 1184 3 19:18 App key社op但人物名字少于4跳过,大于4复活 102 -- 4:27 App How to create a ballon plot? 如何创建气球图 30 -- 3:31 App How to draw KEGG pathway summary plot | 如何绘制KEGG通路汇总图 8 --...
script importosimportjsonimportreclassKOParser(object):def__init__(self,map):self.map=mapdefjson_parser(self):# check the existance of json fileifos.path.exists(self.map):withopen(self.map,'r')asf:ko_list=[]# convert json to dictmap_dict=json.load(f)# print(type(map_dict)) dictmap...
I tried to run this using a set of compound IDs, and I got an error. I also get the same error using your example code. , but if I run enrichKEGG using gene ID, it works fine, suggesting that the KEGG website is okay, but the cpd IDs don't map. ...
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The following public databases were used during the data analysis: (1) dbSNP (v.138) (https://www.ncbi.nlm.nih.gov/snp/); (2) Kyoto Encyclopedia of Genes and Genomes (https://www.genome.jp/kegg/); (3) Gene Ontology Resource (https://www.geneontology.org/). Source data are ...
Functions of differentially abundant metabolites (DAMs) were annotated using KEGG database (http://www.kegg.jp/kegg/pathway.html) and MetWare metabolite database. 2.3. Measurements of FAAs, lignin, Cu, total N, NH4+-N, NO3--N, TSPs, total phenolics, GSH and MDA in leaves FAAs were ...
The relative abundance of identified differential metabolites between groups (n = 5) in key KEGG metabolic pathways. These KEGG metabolic pathways were descripted as biosynthesis of unsaturated fatty acids (A), glycerolipid metabolism (B), steroid biosynthesis (C) and citrate cycle/TCA cycle ...
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to 2.1 × 105predicted coding sequences of the 78 rMAGS. Per time-point, on average 1.5 × 104 ± 4.5 × 103(s.d.) spectral matches, i.e., on average 94% of all rMAG-associated matches could be assigned to genes with predicted functions, i.e., assigned KEGG ...
IL-17A and IFN-γ expression in mouse CD4+ T cells activated under Th1 and Th17 polarizing conditions and transduced with MIGR1, REV-ERBα or REV-ERBβ retroviral vectors. Data are representative of 3 independent experiments with triplicate wells for each condition. (F) KEGG pathway analysis ...