python featurecount_2_fpkm_tpm.py -h usage: --- This is a little script to calculate the fpkm and tpm. The inputfilemust be featurecounts resultfile---ifyou have any question please contact me,email:albert_xin@qq.com[-h][-i][-o FILE_OUT]optional arguments: -h, --help show thish...
TPM,RPKM 直接定量工具也很多,比如cufflink【rpkm】,stringtie【rpkm,TPM】.需要注意的是: 1.hisat2需要添加特定参数进行比对,才可以与cufflink进行配套使用,否则会报错; stringtie 可以方便计算TPM,但是每一次计算的gene数目不一样,比如有时候20001,20005 不等,需要手动过滤一些不相关的gene 有时候cufflink和featurecou...
python featurecount_2_fpkm_tpm.py -h usage: --- This is a little script to calculate the fpkm and tpm. The inputfilemust be featurecounts resultfile---ifyou have any question please contact me,email:albert_xin@qq.com[-h][-i][-o FILE_OUT]optional arguments: -h, --help show thish...