KalinIvanov-l/ATACmain 1 Branch 0 Tags Code This branch is 168 commits behind Julien-cpsn/ATAC:main.Folders and filesLatest commit Julien-cpsn Update README.md 4abed8a· Apr 17, 2024 History193 Commits .cargo Updated config.toml Feb 23, 2024...
The LNCaP–ENZ168, VCaP, and VCaP–ENZ48 single-cell RNA-seq samples were prepared with Drop-seq54using the Dolomite cell encapsulation system (Dolomite Bio). Cells were trypsinized with TrypLETMExpress Enzyme (ThermoFisher Scientific, #12604021), spun down (5 min at 300 × g), and...
Place of Origin:Taiwan, China, Japan;Brand Name:Original;Model Number:ATa4jB;Application:ATa4jB;Type:ATa4jB;Series:ATa4jB;Features:ATa4jB;Mounting Type:SOP DIP SOT QFP QFN BGA;Description:ATa4jB;Manufacturing Date Code:2024;|Alibaba.com
Analysis pipeline for ATAC-seq Data. Contribute to luolq/ATAC-pipe development by creating an account on GitHub.
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Cell 168, 584–599 (2017). Engelman, J. A., Zejnullahu, K., Mitsudomi, T., Song, Y., Hyland, C., Park, J. O. et al. MET Amplification leads to Gefitinib resistance in lung cancer by activating ERBB3 signaling. Science 316, 1039–1043 (2007). Hata, A. N., Niederst, M....
为了证实这些细胞亚群与ENZ抗性的其他独立模型有关,使用标签转移方法探索独立scRNA-seq数据集中的匹配细胞群。转移scRNA-seq簇标签证实了LNCaP亲代和RES-C中原始簇的存在,在RES-C和LNCaP-ENZ168中证实了ENZ诱导簇的存在。 图片 由于大多数scATAC-seq簇的细胞比例与scRNA-seq的簇3细胞相对应(图3e),这表明该簇的...
Transposase-Accessible Chromatin followed by sequencing (ATAC-seq) is a simple protocol for detection of open chromatin. Computational footprinting, the search for regions with depletion of cleavage events due to transcription factor binding, is poorly understood for ATAC-seq. We propose the first foot...
Genome annotation (gene names) missing in IGV session file #168 ktrns opened this issue Feb 17, 2022· 1 comment Comments ktrns commented Feb 17, 2022 Hi there, We noticed that it would be very useful to have the genome annotation already loaded to the IGV session file that is genera...