(base) [root@PC1 test]#vcftools --vcf outcome.vcf --max-missing0.9--plink --outtest &> /dev/null(base) [root@PC1 test]# ls## 最大丢失率不超过1-0.9outcome.map outcome.ped outcome.vcf test.map test.ped (base) [root@PC1 test]#cat test.map1snp402037501snp50312707...
Dear developers, I saw a strange behavior using vcftools with --max-missing option: If I filter this vcf file with --minDP 2 and --max-missing 0.7 in the same command line, I will retrieve SNPs called on 60% of my samples, while filterin...
vcftools 没有这个功能，你可以看看他的帮助：https://vcftools.sourceforge.net/man_latest.html ...