SGN VIGS Tool:https://vigs.solgenomics.net/ 使用简单,把自己需要沉默的基因cds序列粘贴进去直接RUN即可。SGN VIGS Tool除了可以选取烟草VIGS片段外,该数据库还包含许多物种的基因组。如: 如果你需要的物种或基因组不在列表中,或可以写邮件告知网站的维护人员,说不定就会被添加其中。邮件地址:sgn-feedback@solgen...
(http://vigs.solgenomics.net). TheSGNVIGStoolalgorithmsimulates in silico the VIGS pro- cesses occurring in the plant cell (Figure 1A). In the first stage, the target gene is processed in all possible 21-nucleotide frag- ments (or any size chosen by the user between 18 and 24 nucle...
The SGN VIGS Tool: User-Friendly Software to Design Virus-Induced Gene Silencing (VIGS) Constructs for Functional Genomics. Mol Plant. 2015; 8: 486-488. doi: 10.1016/j.molp.2014.11.024 PMID: 25667001The SGN VIGS Tool: User-Friendly Software to Design Virus-Induced Gene Silencing (VIGS)...
Stand Alone version of SGN VIGS Tool Developed on a Catalyst framework To add a VIGS dataset, use the following commands: unzip GCA_003287315.1.zip in emacs, replace the string >lcl| with > , if present (otherwise, fastacmd will not work correctly) Copy the dataset to the correct locatio...
To install the tool independently of the SGN, a stand-alone version was developed that can be installed as a web tool running on a Catalyst server (https://github.com/solgenomics/VIGS). Not all plant species are amenable to VIGS, and different species show different silencing efficiencies. ...
救救孩子吧VIGS怎么做啊 | VIGS怎么选取靶基因片段啊,都说SGN-VIGS好用,但是怎么用啊 发布于 2023-09-07 17:59・IP 属地吉林 赞同 分享收藏 写下你的评论... 还没有评论,发表第一个评论吧登录知乎,您可以享受以下权益: 更懂你的优质内容 更专业的大咖答主 更深度的互动交流 更高效的创...
git clone https://github.com/solgenomics/VIGS cd VIGS nano docker-compose.yml 对于docker-compose.yml,修改(关键在于把那个mason文件夹给映射进去) services: vigs_tool: ports: - 8088:8088 volumes: - type: bind source: $HOME/vigs_sequence_files ...
(2015). The SGN VIGS tool: user-friendly software to design virus- induced gene silencing (VIGS) constructs for functional genomics. Mol. Plant 8: 486-488.Fernandez-Pozo N, Rosli HG, Martin GB, Mueller LA (2015) The SGN VIGS tool: user-friendly software to design virus-induced gene ...
(2015). The SGN VIGS tool: user-friendly software to design virus- induced gene silencing (VIGS) constructs for functional genomics. Mol. Plant 8: 486-488.N. Fernandez-Pozo, H. G. Rosli, G. B. Martin, L. A. Mueller, The SGN VIGS tool: User- friendly software to design virus-...