A review of RNA-Seq expression units http://www.rna-seqblog.com/rpkm-fpkm-and-tpm-clearly-explained/ http://www.bio-info-trainee.com/2017.html
RNA-Seq 2014 - European Pharmaceutical Reviewpharmareview
In this review, open questions regarding RNA-sequencing data nature are discussed and highlighted, indicating important future research topics in statistics that should be addressed for a better analysis of already available and new appearing gene expression data. Moreover, a comparative analysis of ...
Cellular and Molecular Life Sciences REVIEW RNA-seq: from technology to biology 来自 Citeseer 喜欢 0 阅读量: 46 作者:S Marguerat,J Bähler,T Genome,S Marguerat,J Bähler 收藏 引用 批量引用 报错 分享 全部来源 免费下载 求助全文 Citeseer zjubiolab.zju.edu.cn (全网免费下载) scolaris.beta....
Bulk segregation analysis in the NGS era: a review of its teenage years[J]. Plant J, 2022, 109(6): 1355-1374. [30]Yang LM, Lei L, Li P, et al. Identification of candidate genes con- ferring cold tolerance to rice(Oryza sativa L.)at the bud-bursting stage using bulk segregant ...
The polychaete Boccardia wellingtonensis is a poecilogonous species that produces different larval types. Females may lay Type I capsules, in which only planktotrophic larvae are present, or Type III capsules that contain planktotrophic and adelphophagic
Peer review file Description of additional supplementary files Supplementary data 1 Supplementary data 2 Supplementary data 3 Supplementary data 4 Source data Source data Reporting summary Rights and permissions Open Access This article is licensed under a Creative Commons Attribution 4.0 International License...
review : Yongjing Liu, et al. Brief in Bioinformatics, 2019. peek calling: F-Seq peek annotation: ChIPpeakAnno Motif analysis: MEME-ChIP (5.3) ATAC-seq pipeline recommended by Harward informatics peek calling: MACS2 peak annotation: ChIPseeker Motif discovery: HOMER 6) Chromatin and Hi-C Mo...
The FDA-led SEquencing Quality Control (SEQC) consortium has made considerable progress in this direction, and is the subject of this review. Specifically, three RNA-seq platforms (Illumina HiSeq, Life Technologies SOLiD, and Roche 454) were extensively evaluated at multiple sites to assess cross...
In this review, we also describe the analysis of nascent RNA, alternative splicing, and scRNA-seq. In the subsequent chapters, we first describe the basic tools to analyze RNA-seq data and consider the advantages and disadvantages of those (Table 1). Second, we move on to more complex ...