Hi all, I ran the pipeline to analyze bulk RNAseq including TIN module from RSeQC to remove samples with low median TIN (thanks for integrating It to the pipeline it is definitely helpful!!). I ran nfcore/rnaseq ( see command line below) and after 21 hours, I get this output in xls...
Zhao S, Zhang B (2015) A comprehensive evaluation of ensembl, RefSeq, and UCSC annotations in the context of RNA-seq read mapping and gene quantification. BMC Genomics 16: 97.Zhao S, Zhang B. A comprehensive evaluation of ensembl, RefSeq, and UCSC annotations in the con- text of RNA-...
NCBI使用手册(英文)ch18.The Reference Sequence (RefSeq) Project.pdf,NCBI Handbook The Reference Sequence (RefSeq) Project 18. The Reference Sequence (RefSeq) Project Kim Pruitt, Tatiana Tatusova, and Donna Maglott Created: October 09, 2002 Updated: Janu
A comprehensive evaluation of ensembl, RefSeq, and UCSC annotations in the con- text of RNA-seq read mapping and gene quantification. BMC Genomics. 2015 Feb 18; 16:97. https:// doi.org/10.1186/s12864-015-1308-8 PMID: 25765860Zhao, S. and Zhang, B. (2015). A comprehensive evaluation ...