prefetch错误https prefetch-vSRR925811Maximum file size download limit is20,971,520KB2019-06-16T01:54:42prefetch.2.3:Using'ascp'2019-06-16T01:54:prefetch.Using'/home/kelly/.aspera/connect/bin/ascp'err:error unexpectedwhileresolving tree within virtual file system module-failed to resolve accession...
SRA数据库下载:首先记住,数据的存放地址是ftp-private.ncbi.nlm.nih.gov,SRA在Aspera的用户名是anonftp,下载举例: 如果我想下载SRR949627.sra文件,首先我需要找到地址,去ncbi ftp-private或者ncbi faspftp,一层层寻找,直至找到,然后记下链接地址,就可以开始下载了: ascp -v -i ~/.aspera/connect/etc/asperaweb...
BBtools (bioinformatics tools that allow analysis of DNA and RNA sequence data;https://jgi.doe.gov/data-and-tools/bbtools/bb-tools-user-guide/) Seqtk (a toolkit for reads subsampling;https://github.com/lh3/seqtk) SPAdes (genome assembler;https://github.com/ablab/spades) Bandage (allows asse...
GitXiv:http://www.gitxiv.com/?cat[0]=bioinformatics Bio.Tools:https://bio.tools/ Biosharing:https://biosharing.org Fast BWT creation:https://github.com/hitbc/deBWT Assay Design Choosing assays based on complementarity to existing data: Databases...
1、使用wget下载对应版本的SRA Toolkit # Ubuntu Linux 64 bit architecture - non-sudo tar archive wget -P ~/Biosofts/链接 2、使用tar命令解压缩文件 tar zvxf ~/Seqs/sratoolkit.2.9.2-ubuntu64.tar.gz -C ~/Biosofts 3、测试安装是否成功
[请求流程](https://raw.githubusercontent.com/javanan/blife/master/readme/dbprocess.png) \ No newline at end of file + + diff --git a/commone/src/main/java/com/blife/util/Digests.java b/common...
//github.com/axa-ch/cyclic-schemas-test.git", - "lint-staged": "10.5.4", - "mocha": "8.3.2", - "nyc": "15.1.0", - "semantic-release": "17.4.2", - "unist-util-select": "3.0.4" - }, - "engines": { - "node": ">= 10.0.0" - } - }, - "node_modules/@adob...
42prefetch.2.3.5:Using'/home/kelly/.aspera/connect/bin/ascp'2019-06-16T01:54:42prefetch.2.3.5err:error unexpectedwhileresolving tree withinvirtualfile system module-failed to resolve accession'SRR925811'-Obsoletesoftware.Seehttps://github.com/ncbi/sra-tools/wiki/Obsolete-software(406)Redirected!!
https://github.com/smuthubabu/awesome-public-datasets/blob/master/README.rst - smuthubabu/awesome-public-datasets
(see: https://docs.github.com/en/actions/using-workflows/workflow-syntax-for-github-actions#concurrency) +concurrency: + group: ${{ github.workflow }}-${{ github.ref }} + cancel-in-progress: true + +jobs: + release-job: + runs-on: ubuntu-latest + steps: + - uses: actions/check...