5 SRA METADATA Notice: click the “Download Excel spreadsheet” to download the excel file Then fill the file “Choose file” to upload the finished Excel file. 6 FILES Notice:choose FTP method to upload data; then click “FTP upload instructions”, get the account and password for uploadin...
The SRA Toolkit provides tools to download and access SRA data. At the risk of starting this page off on a negative note,please do not download data using generic toolssuch asftp,wget, etc. Doing so can create incomplete images and complicate problem diagnosis. ...
Command Line to download bam Files gdc-client download -m manifest_file -t tokenfile token_file: see step 2 manifest_file: see step step 8AboutDescribes how to download RNA-Seq controlled data from GTEx via sra-toolkit and from TCGA via GDC Data Transfer Tool ...
BankIt (https://www.ncbi.nlm.nih.gov/WebSub/?tool=genbank), a WWW-based submission tool, accepts all standard GenBank submission except: (i) sequences with an alignment (you can use Sequin), (ii)raw read data (you can use Submission Portal-SRA), (iii) transcriptome shotgun assembly...
Influenza virus can escape most antibodies with single mutations. However, rare antibodies broadly neutralize many viral strains. It is unclear how easily influenza virus might escape such antibodies if there was strong pressure to do so. Here, we map al
There is extensive health and public health literature on the ‘evidence-policy gap’, exploring the frustrating experiences of scientists trying to secure a response to the problems and solutions they raise and identifying the need for better evidence t
Recent political campaigns on both sides of the Atlantic have led some to argue that we live in the age of ‘post-factual’ or ‘post-truth’ politics, suggesting evidence has a limited role in debate and public policy. How can we demonstrate the public
Recent political campaigns on both sides of the Atlantic have led some to argue that we live in the age of ‘post-factual’ or ‘post-truth’ politics, suggesting evidence has a limited role in debate and public policy. How can we demonstrate the public