Multivariate statistical analysis performed to assess the characteristics of each growing medium revealed the key variables impacting the resident microbial community, such as potassium and ammonia concentrations. High throughput sequencing analysis of the bacterial abundance of the communities present in ...
In this study, we reported the first comprehensive study on miRNAs ofA. comosusvar.bracteatusperformed through high throughput sequencing and bioinformatics analysis methods. Our results showed that there are 163 novel miRNAs being identified, and their potential target genes are predicted and functional...
Genome-wide association study (GWAS) uses high-throughput sequencing analysis to associate variations in genetics to a particular disease. From: Studies in Natural Products Chemistry, 2022 About this pageAdd to MendeleySet alert Also in subject areas: Biochemistry, Genetics and Molecular Biology Immunol...
Analysiso high‑throughputsequencing or cecalmicrobiotadiversity and unctionin hensunder diferentrearingsystems Shuiqin Shi 1 ·Zhao Qi 2 ·Bintao Gu 1 ·Baoyan Cheng 1 ·Jian Tu 1 ·Xiangjun Song 1 ·Yin Shao 1 ·Hongmei Liu 1 · Kezong Qi 1 ·Shaowen Li 2 Received:9August2019/Accepted...
high-throughput sequencing based microbiomic analysis has become a powerful method for providing profound insights into the microbial community, its diversity and ecological functions of microbial microorganism in mangrove sediments81. Although, the sediment samples in the present work were only collected ...
In the last decade there has been an explosion in the development of new technologies for high-throughput DNA sequencing, which has led to the sharp decline of associated costs. This has allowed scientists to develop a multitude of methodologies to study, on a global scale, the genomes and ...
Crossbow: Rapid Whole Genome SNP Analysis Alignbillions findSNPs Reusesoftware components: Hadoop Streaming Map:Bowtie Emit(chromome region, alignment) Shuffle:Hadoop sortalignments Reduce:SoapSNP (Li et al, 2009) Scanalignments divergentcolumns sequencingerror, known SNPs Results coming soon Short Read...
is shorter than previous sequencing technique,yet these advantages are symbol of sequencing ,which is the same case of former techniques.However，high-throughput sequencing canenable the transcriptome and genome of a species the panorama of a detailed analysis，so it was also called deepsequencing. ...
mirTools: microRNA profiling and discovery based on high-throughput sequencing Gene Expression ProfilingSequence Analysis, RNAInternetSoftwareUser-Computer InterfaceHigh-Throughput Screening AssaysRNA, MessengermiRNAs are small, non-coding RNA... E Zhu,F Zhao,X Gang,... - 《Nucleic Acids Research》 ...
Bioinformatics analysis of sequencing data The raw sequences were processed as described by Sunkaret al.[25]. Following removal of the vector sequences, modified sequences from 18 nt to 30 nt were used for further analyses. To begin with, rRNA, tRNA, snRNA, snoRNA and material containing the...