The GTEx project of the NIH Common Fund aims to establish a resource database and associated tissue bank in which to study the relationship between genetic variation and gene expression and other molecular phen
database and tissue bank in which to study the relationship between genetic variation and gene expression in reference/non- diseased human tissues http://commonfund.nih.gov/GTEx GTEx – Overview (II) Common Fund 2-year feasibility pilot project Specific aims: Enroll 160 post-mortem donors,...
Here we describe the Genotype-Tissue Expression (GTEx) project, which will establish a resource database and associated tissue bank for the scientific community to study the relationship between genetic variation and gene expression in human tissues....
Genotype-Tissue Expression:基因组织表达 热度: Using expression and genotype to predict drug response in yeast(使用表达和基因型预测酵母中的药物反应) 热度: 重组腺病毒基因表达系统 Adeno-X Expression System 热度: OPEN 580volume45|NumBeR6|JuNe2013|naturegenetics ...
This is a normalized dataset from the original RNAseq dataset downloaded from Genotype-Tissue Expression (GTEx) project: www.gtexportal.org: RNA-SeQCv1.1.8 gene rpkm Pilot V3 patch1.The data was used to analyze how tissue samples are related to each other in terms of gene expression data ...
在讨论为什么Salzburg数出的基因数量会大大增加,各方讨论的结果是,首先,Salzbug用了更大的数据库GTEx(Genotype-Tissue Expression );其次,Salzburg首次抛弃了手动挑拣,而是选择用电脑程序来分析数据的方法;最后,Salzbug扩大了基因的概念,他们认为那些不是以蛋白质编码的RNA可能也十分重要,需要考虑进去。
GTEx Consortium The Genotype-Tissue Expression (GTEx) project. Nat. Genet. 45, 580–585 (2013). Article Google Scholar Lappalainen, T. et al. Transcriptome and genome sequencing uncovers functional variation in humans. Nature 501, 506–511 (2013). Article CAS Google Scholar t Hoen, P. A...
Based on GTEx data [46], the highest expression of both CAPN3 and TTN is reported in skeletal muscles, while expression of these genes in whole blood samples is minimal. Since their functions are considered non-essential in whole blood samples and there is no need to stabilise the CAPN3 ...
Includes the HiC data processes usingHiC-Pro(v2.11.4)and estimates of significant intra-chromosome contacts usingFitHiC(v2.0.7). Data availability Gene expression data and cis-eQTLs/sQTLs have been uploaded to:https://figshare.com/articles/dataset/CattleGTEx-Gene_expression_data/21564780 ...
Among these studies, the age-associated gene set from the Genotype-Tissue Expression (GTEx) project25 is of high quality. This set of aging-associated genes was screened out by using a regression model on large-sample RNA-Seq data, collected from >40 tissues from hundreds of healthy ...