在接下来的众多分析项目中,我们仅选择Gene Regulatory Networks(GRN)中的TF-gene Interactions。 接着,选择TF-gene Interaction database,我们这里选择JASPAR数据库用于转录因子的预测。 很快,TF-gene的互作网络就完成了构建,如下,点击SIF,可下载sif格式的网络图文件导入到Cytoscape中进行分析和展示。 继续点击Proceed按钮...
DGIdb数据库(Drug-Gene Interaction database),是一个药物-基因相互作用数据库,提供了基因与其已知或潜在药物关联信息,目前已经更新到4.0版本。里面的基因主要是癌基因,但是也有一些其他疾病(例如阿尔兹海默病、心脏病、糖尿病等)的相关基因。DGIdb一共有超过14000种药物-基因的相互作用,涉及2600个基因和6300中靶向这些...
DATABASE DEVICE FOR GENE INTERACTION, RETRIEVAL PROGRAM FOR GENE INTERACTION, AND RETRIEVAL METHOD FOR GENE INTERACTIONPROBLEM TO BE SOLVED: To display an edge retrieval result list table 320 by using a Z score (statistical information), dynamic characteristics, genes, or the like as retrieval ...
DATABASE DEVICE FOR GENE INTERACTION, RETRIEVAL PR 优质文献 相似文献PrimerBank: a resource of human and mouse PCR primer pairs for gene expression detection and quantification PrimerBank (http://pga.mgh.harvard.edu/primerbank/) is a public resource for the retrieval of human and mouse primer pa...
当涉及大量的SNP时,遗传关联研究中的基因与基因相互作用需要大量的计算。 大多数最新的中央处理器(CPU)具有多个内核,而图形处理器(GPU)也具有数百个内核,并且最近已用于实现更快的科学软件。 但是,目前尚无遗传分析软件包可让用户充分利用这些多核设备的计算能力进行二进制特征的遗传相互作用分析。 在这里,我们介绍...
of STRING database, as well as constructed a protein-protein interaction (PPI) network by Cytoscape software Consequently significant genes with potential ... Y Zhuang,Y Guan,B Sun,... 被引量: 0发表: 2020年 Identification of SLITRK6 as a Novel Biomarker in hepatocellular carcinoma by comprehe...
interaction analysis. In addition, environment also plays an important role in the drug response through GXE interactions. Some significant results were validated in another cohort. The main purpose of this data descriptor is to share our data set. All kinds of file types needed for GXG and GXE...
Define Gene interaction. Gene interaction synonyms, Gene interaction pronunciation, Gene interaction translation, English dictionary definition of Gene interaction. n. pl. e·pis·ta·ses 1. An interaction between nonallelic genes in which the genotype a
Gene-gene interaction analysis for the survival phenotype based on the standardized residuals from parametric regression models. Bioinformatics and Biomedicine ... L Seungyeoun,K Min-Seok,OJ Mi,... - 《Bioinformatics》 被引量: 29发表: 2012年 Gene-gene interaction analysis for the survival phenotyp...
Gene–gene interaction (epistasis) exists when susceptibility genes act together to cause a disease. When these genes act epistatically in the same pathway, then, the effect of a set of genes might be large, though, the marginal effect of each gene is small [40]. In addition, genes and ...