However, because of the complex, multistaged analysis workflow, it is still difficult for an experimental investigator to conduct the analysis of his or her own ChIP-seq data. In this chapter, we review the basic design of ChIP-seq experiments and provide an in-depth tutorial on how to ...
不同处理条件的CHIP-seq的差异peaks分析:http://www.slideshare.net/thefacultyl/diffreps-automated-chipseq-differential-analysis-package 一个实际的CHIP-seq数据分析例子:http://www.biologie.ens.fr/~mthomas/other/chip-seq-training/ http://biow.sb-roscoff.fr/ecolebioinfo/trainingmaterial/chip-seq/docum...
不同处理条件的CHIP-seq的差异peaks分析:http://www.slideshare.net/thefacultyl/diffreps-automated-chipseq-differential-analysis-package 一个实际的CHIP-seq数据分析例子:http://www.biologie.ens.fr/~mthomas/other/chip-seq-training/ http://biow.sb-roscoff.fr/ecolebioinfo/trainingmaterial/chip-seq/docum...
CHIP-seq的确是非常完善的NGS流程,各种资料层出不穷。 大家首先可以看下面几个完整流程的PPT来对CHIP-seq流程有个大致的印象,我对前面提到的文献数据处理的几个要点,就跟下面这个图片类似。 QuEST is a statistical software for analysis of ChIP-Seq data with data and analysis results visualization through UCS...
我只能说,CHIP-seq的确是非常完善的NGS流程了,各种资料层出不穷,大家首先可以看下面几个完整流程的PPT来对CHIP-seq流程有个大致的印象,我对前面提到的文献数据处理的几个要点,就跟下面这个图片类似: QuEST is a statistical software for analysis of ChIP-Seq data with data and analysis results visualization ...
ChIP-seq 核心分析 下游分析 http://icb.med.cornell.edu/wiki/index.php/Elementolab/ChIPseeqer_Tutorial 【怪毛匠子 整理】 ChIP-seq【核心分析 下游分析】 Core Analysis : Peak detection:Split raw datathenrun ChIPseeqer Core Analysis : Quality Control:QC analysisfor the raw reads (afterSplit raw ...
ChIP-seq analysis notes from Ming Tang. Contribute to biobug16/ChIP-seq-analysis development by creating an account on GitHub.
There is a nice tutorial using bioconductor in f1000 researchFrom reads to regions: a Bioconductor workflow to detect differential binding in ChIP-seq data
ChIP-seq：直接检测与转录因子结合的DNA序列，但一次测序只能提供一个转录因子的信息，检出率相对较低。D...
DiffBind differential binding analysis of ChIP-Seq peak data Statistical analysis of ChIP-Seq data remains challenging, due to the highly structured nature of the data and the paucity of replicates. Current approaches to detect differentially bound or modified regions are mainly borrowedfrom RNA-S.....