A cell atlas for the mouse brain. Front. Neuroinform. https://doi.org/10.3389/fninf.2018.00084 (2018). Dong, H. W. The Allen Reference Atlas: A Digital Color Brain Atlas of the C57Bl/6J Male Mouse. (John Wiley & Sons Inc, 2008). Technical white paper: Allen mouse common ...
To facilitate the use of our single-cell datasets, an online tool was generated for evaluation of gene expression at single-cell resolution:www.brainimmuneatlas.org. All gene–cell count matrices can also be downloaded via this link. In addition, all scRNA-seq and bulk RNA-seq data are also...
A vascular atlas of the mouse brain in Waxholm reference spaceBadea, AlexandraGhaghada, KetanCofer, GaryQi, YiHess, AndreasJohnson, G Allan
Brain Atlas for the adult mouse with panels of cell type-specific genes for neurons, astrocytes, and oligodendrocytes from previously published transcriptome ... Y.,Ko,S.,... - 《Proceedings of the National Academy of Sciences》 被引量: 74发表: 2013年 A Resource for Transcriptomic Analysis in...
To demonstrate how the atlas can be used to analyze different datasets and track how individual cell types emerge in the developing brain, the team focused on GABAergic neurons, which are nerve cells that play a key communication role in the brain. This cell type has been implicated in schizo...
Experimental Medicine in Göttingen have for the first time quantified the entire set of proteins ‒ the proteome ‒ in the adult mouse brain. The information about which proteins and how many of them are found in the various cell types and regions has been summarized in a protein atlas....
Single-cell transcriptomics can provide quantitative molecular signatures for large, unbiased samples of the diverse cell types in the brain. With the proliferation of multi-omics datasets, a major challenge is to validate and integrate results into a biological understanding of cell-type organization....
Here we report a brain-wide, cellular-level, mesoscale connectome for the . The Allen Brain Connectivity Atlas uses enhanced (EGFP)-expressing adeno-associated viral vectors to trace axonal projections from defined regions and cell types, and high-throughput serial two-tomography to image the EGFP...
Our study establishes a brain-wide, single-cell DNA methylome and 3D multi-omic atlas and provides a valuable resource for comprehending the cellular–spatial and regulatory genome diversity of the mouse brain. Related papers Citation: Liu, Hanqing, Qiurui Zeng, Jingtian Zhou, Anna Bartlett, ...
Salk Institute researchers, as part of a larger collaboration with research teams around the world, analyzed more than half a million brain cells from three human brains to assemble an atlas of hundreds of cell types that make up a human brain in unprecedented detail. ...