Leinonen R, Sugawara H, Shumway M: The sequence read archive. Nucleic Acids Research 2010:gkq1019.Leinonen R, Sugawara H, Shumway M. International Nucleotide Sequence Database Collaboration. The sequence read archive. Nucleic Acids Res. 2010; 39 :D19–D21. doi:...
The sequence read archive. Nucleic Acids Res. 39, D19–D21 (2011). Article CAS PubMed Google Scholar Su, Z. et al. A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium. Nat. Biotechnol. 32, 903–914 (2014). ...
The raw data of single-cell RNA-seq and bulk RNA-seq for Jin668 and TM-1 have been deposited in the Sequence Read Archive under accession number PRJNA895968 [95] and PRJNA895970 [96]. Data can also be explored at http://jinlab.hzau.edu.cn/CLC/ or http://jinlab.hzau.edu.cn:8000...
All DNA and RNA reads were deposited at the Sequence Read Archive under the bioproject accession PRJNA379262 and under the following SRA accession numbers: PacBio P4/C2 data, SRX2700681 and SRX2700682; PacBio P6/C4 data, SRX2700683; PacBio CCS data, SRX2700684; DNA shotgun, SRX2700686; ...
and large airway epithelium of asthmatic and control individuals (S1); (2) multi-tissue RNA-seq data from Genotype-Tissue Expression (GTEx v6) from 53 human body sites [33] (n = 8555) (S2); and (3) randomly selected RNA-seq samples from the Sequence Read Archive (SRA) (n =...
Raw sequence reads of 28 fecal samples and 8 carrion's swabs are publicly available from the NCBI Sequence Read Archive under the accession number PRJNA723140. A total of 13 isolated strains' 16S rDNA sequences have been deposited in the GenBank database under accession numbers: MT740347, MT...
Thesequence labeling modelis calledsoftware. To select the sequence labelling algorithm to be used, use the config parameterengineunder model namedname: "software": For CRF: models: -name:"software"engine:"wapiti" For Deep Learning architectures, which provide significantly better accuracy, indicatede...
// A function that generates the fibonacci sequence func fibonacci(_ n: Int) -> [Int] { guard n >= 0 else { return [] } var result: [Int] = [] var a: Int = 0 var b: Int = 1 for _ in 0..<n { result.append(a) (a, b) = (b, a + b) } return result } Ed tr...
RNA-seq data generated in this study are deposited in the Sequence Read Archive database under the accession numberPRJNA713612. FUSCC TNBC sequence data were available in the NCBI Gene Expression Omnibus (OncoScan array;GSE118527) and Sequence Read Archive (whole-exome sequencing and RNA-seq;SRP...
RNA-seq raw data obtained from cecum microbiota (SUB5333382) and liver (SUB5359060) sequencing were deposited in the Sequence Read Archive of the NCBI (https://www.ncbi.nlm.nih.gov/sra). Other data that support the findings of this study are available from the corresponding author upon reque...