Use of the Oxford Nanopore MinIONTM sequencer for MLST genotyping of vancomycin-resistant enterococciDisseminated cryptococcosis is rare but can often become severe with a poor outcome. Given recent reports that matrix-assisted laser desorption/ionization time-of-flight mass spectrometry(MALDI-TOF MS)...
populations Spyros Oikonomopoulos1,Yu Chang Wang1, Haig Djambazian1, Dunarel Badescu1 & Jiannis Ragoussis1,2,3 To assess the performance of the Oxford Nanopore Technologies MinION sequencing platform, cDNAs from the External RNA Controls Consortium (ERCC) RNA Spike-In mix were ...
The data we present here shows that RNAseq studies using the Oxford Nanopore Technologies MinION sequencer have the potential to redefine the level of information gathered by a single RNAseq experiment. By benchmarking our experimental and computational pipelines on ONT MinION data derived from a mix...
This is the first demonstration of direct RNA sequencing on an Oxford Nanopore MinION sequencer. Article PubMed Google Scholar Tilgner, H. et al. Comprehensive transcriptome analysis using synthetic long-read sequencing reveals molecular co-association of distant splicing events. Nat. Biotechnol. 33,...
The Oxford Nanopore Technologies (ONT) MinION is a new sequencing technology that potentially offers read lengths of tens of kilobases (kb) limited only by the length of DNA molecules presented to it. The device has a low capital cost, is by far the most portable DNA sequencer available, and...
The handheld Oxford Nanopore MinION sequencer generates ultra-long reads with minimal cost and time requirements, which makes sequencing genomes at the bench feasible. Here, we sequence the gold standard Arabidopsis thaliana genome (KBS-... TP Michael,F Jupe,F Bemm,... - 《Nature Communications...
The four different types of nucleotides in DNA can be identified by measuring the ionic current conducted through a nanopore when DNA passes through the pore. Recently, Oxford Nanopore Technologies, Ltd. began to distribute its biological DNA sequencer (MinION), and several studies of its ...
Improved data analysis for the MinION nanopore sequencer. Nat. Methods 2015, 12, 351–356. [Google Scholar] [CrossRef] [Green Version] Jain, M.; Olsen, H.E.; Paten, B.; Akeson, M. The Oxford Nanopore MinION: Delivery of nanopore sequencing to the genomics community. Genome Biol. 2016...
The study's approach is rooted in the adoption of next-generation sequencing technologies, with a spotlight on the Oxford MinION nanopore sequencer. The comprehensive sampling strategy involved the capture of rodents and shrews from diverse regions in the ROK using live traps. ...
M. Y. A first look at the Oxford Nanopore MinION sequencer. Mol Ecol Resour 14, 1097–1102 (2014). Article CAS Google Scholar DeSantis, T. Z. et al. Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB. Appl Environ Microbiol 72, 5069–5072 (2006)...