Fig. 1.ITGB6RNA expression in human normal tissue plotted as rates per kilobase million (RPKM). Data were obtained from Human Protein Atlas Dataset available fromproteinatlas.org. 不仅可以直接使用,而且可以独立撑起一个figure。这数据库,我王多余学了。 THE HUMAN PROTEIN ATLAS,简称HPA,分为Cell,Tis...
Background:The human protein atlas (HPA) is an online database containing large sets of protein expression data in normal and cancerous tissues in image form from immunohistochemically (IHC) stained tissue microarrays. In these, the tissue architecture is preserved and thus provides information on ...
First, single-cell features and class probability were extracted for the 12,770 human proteins mapped in the Cell Atlas of the Human Protein Atlas (HPAv20). The feature embedding was reduced by UMAP and colored by image-level labels with high prediction probability (Methods). Clusters with ...
High Throughput Location Proteomics in Confocal Images from the Human Protein Atlas Using a Bag-of-Features Representation The Human Protein Atlas (HPA) is a world-scale project addressed at proteomics research. The HPA stores immunohistological and immunofluorescence images from... R Ramos-Pollán,J...
The GEPIA2 database (http://gepia2.cancer-pku.cn/) "survival analysis" module was used for CCND1 gene survival analysis. Human Protein Atlas (HPA, http://www.proteinatlas.org/) was employed to analyze the protein expression level of CCND1 in head and neck cancer. The amplification status...
Background: The Human Protein Atlas program aims to map human proteins via multiple technologies including imaging, proteomics and transcriptomics. Access of the HPA data is mainly via web-based interface allowing view of individual proteins, which may not be optimal for data analysis of a gene se...
We further investigated the protein levels of RACGAP1 in LUAD using the Human Protein Atlas (HPA) and UALCAN. As shown in Fig. 2a, we found weak or no RACGAP1 expression in normal lung tissues but moderate and high RACGAP1 expression in lung cancer tissues. Consistently, analysis of ...
We thank all the participants of the Human Protein Atlas Image Classification competition. We also acknowledge the staff at Kaggle for providing a competition platform that enabled this study and the competition prize sponsors Leica Microsystems and NVIDIA. The staff of the HPA program provided valuabl...
Tumor Immune Single-cell Hub 2 (TISCH2), a scRNA-seq database focusing on tumor microenvironment (TME), was searched for identifying of major cell types and the expression levels of model genes in different cells in PC46. The Human Protein Atlas (HPA: https://www.proteinatlas.org/) was...
The Human Protein Atlas (HPA) aims to map human proteins via multiple technologies including imaging, proteomics and transcriptomics. Access of the HPA data is mainly via web-based interface allowing views of individual proteins, which may not be optimal for data analysis of a gene set, or auto...