某度百科中是这么介绍的:转录因子结合位点(Transcription factor binding site,TFBS)是与转录因子结合的DNA片段,长度通常在5~20 bp范围内,一个转录因子往往同时调控若干个基因,而它在不同基因上的结合位点具有一定的保守性,又不完全相同。 好了,接下来我们看如何预测整个物种的转录因子和转录因子结合位点。 首先介绍...
结合位点(transcription factor binding site) 结合位点(TFBS)为代表的一类模式识别的程序,是大家传统意义上的模式识别问题。这一类motif 的最大的特点就是大家共有特征较 …www.scribd.com|基于17个网页 3. 转录因子结合位置(Transcript Factor Binding Site) ...pG岛,转录起始位置(TSS)、Poly A信号、转录因子结合...
TFBSTools是一个用于转录因子结合位点(TFBS)分析的工具包,它提供了一系列功能强大的工具和算法,用于预测和分析基因组中的转录因子结合位点。 TFBS(Transcription Factor Binding Site)是指转录因子与DNA上的特定序列结合的区域。转录因子是调控基因表达的关键蛋白质,它们通过与DNA上的TFBS结合来调控基因的转录活性。 使用T...
Transcription factor binding site (TFBS, transcription factor address site, transcription factor recognition element, transcription factor recognition site)doi:10.1002/9783527678679.dg13498John M. HancockJohn Wiley & Sons, Ltd
Latest commit ge11232002 version 1.31.2 Sep 11, 2021 1bda142·Sep 11, 2021 History 327 Commits R data inst man src tests vignettes .Rbuildignore .gitignore DESCRIPTION NAMESPACE NEWS README.md TFBSTools.Rproj README TFBSTools Software Package for Transcription Factor Binding Site (TFBS) Analysi...
The invention relates to a method for prediction of TFBS. The method comprises the following steps: step 1, positioning a genome of a research object; step 2, extracting a gene promoter sequence; step 3, predicting the TFBS; and step 4, carrying out statistical analysis and predicting results...
The following sections are included:IntroductionMethodsSequence PreparationTranscription Factor Binding Site (TFBS) SearchTranscription Factor (TF) RankingMotif SearchExperimental ResultsInteraction of miRNAsTranscription Factors in the Development and Differentiation of Mammalian NeuronsInteraction of miRNAs and ...
针对以上问题,本文在第三章引入多粒度平行网络分别提取序列局部特征和全局特征;在第四章,引入序列相关的转录因子结合位点(Transcription Factor Binding Site,TFBS)特征,通过结合序列多粒度信息和TFBS特征,提升基准数据集的预测精度,并改善模型在严格环境下的预测表现.本文的主要研究内容如下:(1)现有基于序列的EPIs预测器...
Software package for transcription factor binding site (TFBS) analysisGe Tan
Bae SH, Tang H, Wu J, Xie J, Kim S: dPattern: transcription factor binding site (TFBS) discovery in human genome using a discriminative pattern analysis. Bioinformatics 2007, 23:2619-2621.Bae SH, Tang H, Wu J, Xie J, Kim S: dPattern: transcription factor binding site (TFBS) ...