大家好,今天我分享的文章是今年7月底发表在Cancer letters上的文章,"Single cell RNA-seq reveals the CCL5/SDC1 receptor-ligand interaction between T cells and tumor cells in pancreatic cancer"。 1 研究背景 胰腺导管腺癌(pancreatic ductal adenocarcinoma, PDAC)患者的预后在过去30年没有明显改善,5年总生存...
标题:Integrating microarray-based spatial transcriptomics and single-cell RNA-seq reveals tissue architecture in pancreatic ductal adenocarcinomas 期刊:NAT BIOTECHNOL(IF= 68.164) 技术:ScRNA_Seq、空间转录组测序(ST) 导语 单细胞RNA测序(scRNA-seq)能够系统地识别组织中的细胞群,但表征它们的空间组织仍然具有挑战...
这揭示了假定的分化轨迹,Thus, scRNA-seq of normal BM reveals diverse hematopoietic cell types and implies differentiation trajectories consistent with current views of hematopoiesis. 值得注意的地方 1、作者无监督聚类采用的R包的是BackSPIN,不同于Seurat,感兴趣的可以查阅一下。 2、这里的多样本整合的矫正问...
a general framework for the evaluation of computational pipelines, reveals performant single-cell RNA-seq preprocessing tools的研究内容,并建立了一个评估框架pipeComp,评估包括过滤、doublet检测、标准化、特征选择、降噪、降维和聚类等方面。
Research Resource: RNA-Seq Reveals Unique Features of the Pancreatic β-Cell Transcriptome 来自 Semantic Scholar 喜欢 0 阅读量: 119 作者:GM Ku,K Hail,IW Vaughn,MJ Hangauer,MO Chang,MS German,McManus Michael T 摘要: The pancreatic -cell is critical for the maintenance of glycemic control. ...
www.nature.com/scientificreports OPEN RNA‑seq analysis reveals the genes/pathways responsible for genetic plasticity of rice to varying environmental conditions on direct‑sowing and transplanting Suresh Kumar 1*, Karishma Seem1, Santosh Kumar2 & Trilochan Mohapatra3 ...
to characterize its genes and their expression profiles focused in the DEGs related to the different larval trophic modes. This study provides a new source of genetic information for research in polychaetes and reveals differences in the gene expression profiles among the different larval trophic modes...
该文章于2023年2月16日发表在《Cell》杂志,标题为《Bacterial droplet-based single-cell RNA-seq reveals antibiotic-associated heterogeneous cellular states》,美国麻省理工学院-哈佛大学的博德研究所的Peijun Ma为第一作者,Deborah T Hung教授为通讯作者。
While much recent research has expanded our understanding of the molecular interactions between aphids and their host plants, it is lacking for the soybean aphid, Aphis glycines. Since its North American invasion, A. glycines has become one of the most d
ResourceVELCRO-IP RNA-seq reveals ribosome expansion segment function in translation genome-wide Author links open overlay panelKathrin Leppek 1 2 3, Gun Woo Byeon 1 2 3, Kotaro Fujii 1 2, Maria Barna 1 2 4Show more Add to Mendeley Share Cite https://doi.org/10.1016/j.celrep.2020.108629...