3、pull下载指定的genome/asset refgenie pull hg38/fasta-c~/refgenie/genome_config.yaml refgenie pull hg38/gencode_gtf-c~/refgenie/genome_config.yaml refgenie pull hg38_cdna/salmon_index-c~/refgenie/genome_config.yaml#列出本地已经下载的参考数据refgenie list-c~/refgenie/genome_config.yaml ...
refgenie pull hg38/fasta-c~/refgenie/genome_config.yaml #下载hg38版本的gtf文件 refgenie pull hg38/gencode_gtf-c~/refgenie/genome_config.yaml #下载hg38版本的salmon软件的索引文件 refgenie pull hg38_cdna/salmon_index-c~/refgenie/genome_config.yaml #列出本地已经下载的参考数据 refgenie list-...
Refget User-facing documentation is hosted at refgenie.org/refget. In this repository you will find: /refget: The refget package, which provides a Python interface to both remote and local use of the refget protocol. It has clients and functions for both refget sequences and refget seque...
plantref.databio.org server overview This repository contains the files to build and archive genome assets to serve with refgenieserver at http://plantref.databio.org. The whole process is scripted, starting from this repository. From here, we do this basic workflow: Download raw input files...
the genie and the bott1e ref1ections on the fate of the geneva protoco1 in the united states 1918 1928For Americans serving in the First World War, the advent of chemical weapons made a deep impression. For chemists and soldiers, the experience of meeting--and then making--variants of ...
如果你選擇讓系統自動將相片和影片備份到 Google 帳戶,就能在任何裝置上找到這些項目。瞭解如何備份相片和影片。 步驟 1:開啟 Google 相簿 前往 Google 相簿
[ Cross Ref ]Armon C (2010) Is the lithium-for-ALS genie back in the bottle? Neurology 75:586–587Armon C. Is the lithium-for-ALS genie back in the bottle?: not quite. Neurology 2010;75:586e7.Armon C. Is the lithium-for-ALS genie back in the bottle?: Not quite. Neurology. ...
This will use the image in docker.io://databio/seqcolapi, github repo: refgenie/seqcolapi as base, bundle it with the above config, and deploy to the shefflab ECS. Ensure the refget package master branch is as you want it. Deploy the updated secqolapi app to dockerhub (using manual...
RUN pip install https://github.com/databio/refgenieserver/archive/master.zipEOF if [ ! -f "$WORKDIR/testrgs.Dockerfile" ]; then ErrorExit "$LINENO: Failed to create test Dockerfile." fiecho -e "\n-- Build refgenieserver container --\n" ...