super obj03 & resi 2-191 & chain K, obj04 & resi 2-191 & chain C 注:在PyMOL中,还有多种结构叠合的方法,可通过“cealign”、“align”、“super”、“pairfit”、“fit”等命令实现。常用的就是align和super 设置二级结构的颜色 PyMOL中内置了3种二级结构着色策略。 helix sheet loop red yellow ...
Pymol简介及相关操作-abc
基于原子对 ->Wizard->PairFitting7 光线追踪能制作出最高质量的分子图像。 PyMOL是第一个拥有高速光线追踪器的全功能 分子图像程序。8 利用泊松波尔兹曼方程计算水溶液状态下的静电力学。 ->Actions->generate->vaccumelectrostatics9 读取.pdb文件时,矩阵信息就被输出。 “symexp‖命令: ...
PyMOL概述及实例简析
问PyMOL中2个小分子的比对ENDocking非原生配体 在前面的例子中，AutoDock Vina能把配体构象调整到几乎...
2002/09/26 Re: [PyMOL] pair_fit crashes Robert Campbell 2002/09/26 [PyMOL] pair_fit crashes Jeremy Craven 2002/09/25 RE: [PyMOL] Question about crystallographic symmetry Frank Vondelft 2002/09/25 [PyMOL] Question about crystallographic symmetry Michael George Lerner 2002/09/25 [Py...
fit, rms, intra_fit, intra_rms, intra_rms_cur, pair_fit Unfortunately it leaves out the bit included in: PyMOL>help fit DESCRIPTION "fit" superimposes the model in the first selection on to the model in the second selection. Only matching atoms in both selections ...
pair_fit.py /usr/lib/python3/dist-packages/pymol/wizard/pseudoatom.py /usr/lib/python3/dist-packages/pymol/wizard/renaming.py /usr/lib/python3/dist-packages/pymol/wizard/sculpting.py /usr/lib/python3/dist-packages/pymol/wizard/security.py /usr/lib/python3/dist-packages/pymol/wizard/...
浏览完整代码 来源:pair_fit.py 项目:dprada/pymol-open-source示例19def residue_select(self, i): # Show selection message cmd.get_wizard().res_info = 'click search chain '+self.win.residue_list[i][1]+' num '+self.win.residue_list[i][2] cmd.get_wizard().status = 'residue selected...
Opensource molecular visualization system. Fork of http://sourceforge.net/projects/pymol/ We provide pymol windows installer for python2.7, for both pymol 1.5 and pymol 1.6 - pymol/pymol/ChangeLog at master · evonove/pymol