banana (Musa acuminataL.)NBS-LRRGenome-wide identificationFusarium oxysporumf. sp.cubenseAs the largest family among the plant resistance (R) proteins, the nucleotide-binding site-leucine-rich repeat (NBS-LRR) proteins play significant roles in the defense of pathogens. The completion and ...
Keywords:Arabidopsisthaliana,bioinformatics,gene—family,NBS—LRR 0引言 核苷酸结合位点(Nucleotidebindingsite,NBS)和 富含亮氨酸的重复序列(Leucine—richrepeat,LRR)类基 因是植物抗病基因家族中分布比较广泛的家族之一.. NBS这个区域经常广泛的被用于植物抗病基因的识 别和分类,在这个区域里面包含有一些非常保守的基...
SynonymousCodonBiasofNBS—LRRGeneFamilyinRiceandArabidopsis ZHANGXiao—Feng.XUEQing.Zhong'' (DepartmentofAgronomy,CollegeofAgricultureandBiotechnology,ZhejiangUnlters~y, Hangzhou310029,Zhejmng;JamesD.WatsonInstituteofC.enome Sciences,ZhejiangU,Hangzhou310008,Zhefiang,Ch/na) Abstract:Thevariationincodonusageof...
Identification and distribution of the NBS-LRR gene family in the Cassava genome[J]. BMC Genomics, 2015, 16(1):360-374. [12]郭立中 , 韦石泉 . 樟树的一种新病害—樟树溃疡病病原菌鉴 定[J]. 植物病理学报 , 1995, 25(1):28-28. [13]邓先琼 , 郭立中 . 樟树溃疡病病原菌再鉴定[J]. ...
Discovery and analysis of NBS-LRR gene family in sweet potato genome HUANG Xiao-Fang1,2,**, BI Chu-Yun1,2,**, SHI Yuan-Yuan2, HU Yun-Zhuo3, ZHOU Li-Xiang4, LIANG Cai-Xiao4, HUANG Bi-Fang4, XU Ming1,2, LIN Shi-Qiang1,4,*, and CHEN Xuan-Yang1,2,5,* 1 Key Laboratory ...
The NBS-LRR gene family is a class of plant genes involved in disease resistance. miRNA mediates plant response to biotic stresses by regulating the expression of target genes at the transcriptional or post-translational level. Glyma.16G135500, encoding an NBS-LRR-type protein, is a target of ...
NBS–LRR gene family in A. hypogaea cv. Tifrunner We identified 1105 NBS-containing sequences using HMMER in A. hypogaea cv. Tifrunner. Among the NBS-containing sequences, 713 NBS-containing genes contained complete NBS domains and had full-length coding sequences (Additional file 1: Table ...
[RESULTS]204 genes containing NBS domain were found in genome and most of those were located in 1 and 5 chromosome.The NBS-LRR family genes on different chromosomes exist in the form of monogenic gene or gene clusters,and 71.6% of the NBS-LRR genes were located in gene clusters.That ...
Using two-step HMM (Hidden Markov Model) scan strategy, the protein and cDNA sequence of the LRR-NBS-like (leucine rich repeat-nucleotide binding site-like) resistance genes family with 325 and 344 numbers were obtained respectively from a Japonica cultivar Nippon bare genome (International Rice ...
Keywords:Oryzasativa;Bioinformaties;Resistancegene;Genefamily;LRR—NBS 植物基因组水平上存在的大量抗病基因(resis. tancegene,R基因)可使之在生长发育过程中抵抗病 原微生物的侵染.R基因同病原微生物的致病基因 存在着基因对基因(geneforgene)的遗传学关系. 目前已从11种植物中克隆了3O余个R基因,这些 基因绝大...