The Mouse Genome Informatics (MGI) database system combines multiple expertly curated community data resources into a shared knowledge management ecosystem
The changing mouse embryo transcriptome at whole tissue and single-cell resolution Article Open access 29 July 2020 Data availability The data generated in the present study can be downloaded from the NCBI’s Gene Expression Omnibus under accession nos. GSE176063 and GSE178217. The raw and pro...
Alternative splicing (AS) is involved in cell fate decisions and embryonic development. However, regulation of these processes is poorly understood. Here, we have identified the serine threonine kinase receptor-associated protein (STRAP) as a putative sp
PropagationUse of PriCoat™ T25 Flasks (G299) or . Applied Cell Extracellular Matrix (G422) is required for cell adhesion to the culture vessels. Grow cells in ECM-coated culture vessels with the following conditions.The base medium for this cell line is Prigrow X medium available in ABM...
Our data and analyses provide a public resource for mammalian functional genomics.Similar content being viewed by others The Mouse Gene Expression Database (GXD) Chapter © 2021 Paradigm shifts in genomics through the FANTOM projects Article Open access 08 August 2015 Comparative expression ...
The purpose of this work was to study the gene expression of transient receptor potential (TRP) channels in the mouse. The application of a standardized and quantitative technique, TaqMan RT-PCR, should give information about the pattern and relative imp
In the field of mouse genetics the advent of technologies like microarray based expression profiling dramatically increased data availability and sensitivity, yet these advanced methods are often vulnerable to the unavoidable heterogeneity of in vivo material and might therefore reflect differentially expressed...
Gene expression data were corrected for strain-specific SNP effects on microarray hybridization (Experimental Procedures). Using matched tissues reduced non-genetic variation and provided equivalent statistical power in both conditions. Surprisingly, we identified 4,753 genes with significant eQTL in tail ...
Table S2. Cell-type-specific gene expression in mouse and human TG, related to Figure 2 Table S3. Cell-type-specific GO terms and ligand-receptor pairs in mouse and human TG, related to Figure 2 Table S4. Differential expression analyses between human and mouse TG cell types, related to ...
These results indicate that SUPeR-seq detects gene expression in single cells with higher accuracy than other single cell RNA-seq methods do, and has less systematic bias. The higher consistency with bulk analysis is likely due to the random primers used in both the SUPeR-seq and bulk methods...