cleared and imaged with ultramicroscopy. (b) Drawing of the ultramicroscopy setup showing tissue positioning and the light path. (c) A spinal cord segment (length 4 mm, T12 to L2 spine level) of a GFP-M mouse scanned with ultramicroscopy shown in a horizontal view. (d) Cross-view projecti...
A brain atlas is necessary for analyzing structure and function in neuroimaging research. Although various annotation volumes (AVs) for the mouse brain have been proposed, it is common in magnetic resonance imaging (MRI) of the mouse brain that regions-of-interest (ROIs) for brain structures (no...
Brain, Growth, Mice, Anatomy, AtlasesColor images and annotated diagrams of: Gestational Days 12, 14, 16 and 18 Sagittal, coronal and horizontal sectiondoi:10.1007/978-0-387-47093-1_1SchambraUtaSpringer USSchambra U (2008) Prenatal mouse brain atlas. New York: Springer....
文档标签: atlas mouse brain Mouse Brain Atlas 系统标签: atlas mouse brain 12345132432101230501231230246024602468-2-4420-2-4-6-8BregmaBregmaONIPlEPlGlaciE/OVloONMiGrOInteraural8.08mmBregma4.28mmFIGURE0112345132432101230501231230246024602468-2-4420-2-4-6-8BregmaBregmaIPlEPlGlaciE/OVloONGrAInteraural7.72mmBregma...
In this task, mice are placed on an accelerating horizontal rod and learn to walk forward and not fall off. Examining rotarod performance, we found prominent variability within the group with different mice presenting wide range of latencies to fall (Fig. 4a). This behavioral variability could ...
Recent large-scale collaborations are generating major surveys of cell types and connections in the mouse brain, collecting large amounts of data across modalities, spatial scales, and brain areas. Successful integration of these data requires a standard 3D reference atlas. Here, we present the Alle...
(right). Every horizontal line in the plot is a clone, with number of cells per clone indicated by colour.d, UpSet plots displaying clonal intersections between Astrocytes, Neurons, Oligodendrocyte Precursor Cells (OPCs), Neuronal precursors and Oligodentrocytes in STICRE10(top) and STICRE14(...
[1]#get the slide that has the desired brain region and coordinates of the center of the regionimageID=structureToImage(datasetID=datasetID,regionIDs=granuleID)#get the closest atlas image.atlasID=imageToAtlas(imageID$section.image.id,imageID$x,imageID$y,planeOfSection='sagittal')#decide ...
Cell type-specific genes show striking and distinct patterns of spatial expression in the mouse brain Brain Atlas for the adult mouse with panels of cell type-specific genes for neurons, astrocytes, and oligodendrocytes from previously published transcriptome ... Y.,Ko,S.,... - 《Proceedings of...
To distinguish more sophisticated sub-anatomical regions, conventional two-dimensional histochromic atlases are constructed, such as the Allen brain atlas [13,14] and the Paxinos and Franklin mouse brain atlas [15]. There are hundreds of sub-anatomical structures delineated in histochromic atlases. ...