然后,我们可以使用seaborn库来绘制气泡图: plt.figure(figsize=(10,6))sns.scatterplot(x='Pathway',y='Count',size='P-value',data=df)plt.xlabel('KEGG Pathway')plt.ylabel('Gene Count')plt.title('KEGG Enrichment Bubble Chart')plt.show() 1. 2. 3. 4. 5. 6. 以上代码将生成一个简单的KEGG...
此外,对于节点,将 scattermore `包的 geom _ scattermore 与 ggraph的 StatFilter 相结合可以实现更快的呈现。 st <- Sys.time() ggraph(g, x=x, y=y) +geom_edge_link0(aes(color=I(fgcolor)))+ scattermore::geom_scattermore(pointsize=1, stat=StatFilter, aes(x=x, y=y, color=I(fgcolor)...
Scatterplot of differentially expressed genes from KEGG PATHWAY enrichment analysis between A and B groups (A); A1 and A2 groups (B); B1 and B2 groups (C).Hai, Nguyen ThanhLiangjie, ZhaoQigen, Liu
Scatter plot of RNA-seq vs qPCR results. Supplementary Table 2. Results of the GSEA obtained with Web Gestalt software. ES-Enrichment score, NES- Normalized Enrichment Score R_vs_B_KEGG geneSet ssc00190 ssc03050 ssc05012 ssc05010 ssc00071 ssc04723 ssc04920 ssc04932 ssc04714 ssc05016 ssc04145...