Hi, I want to install the package phyloseq from bioconductor using Rstudio (Version 1.1.463 ) with this command: source('http://bioconductor.org/biocLite.R') biocLite('phyloseq') But I get this error: /usr/bin/x86_64-linux-gnu-ld: cannot find -lgfortran /usr/bin/x86_64-linux-gnu-ld...
There is similar process forbioconductor.orgfor its separately administered repository of packages developed for use in the life sciences. They expressly permit private-facing mirrors. Posit/RStudio offers mirroring as part of itscommercial package manager. I believe the charge is US$1000/year. I...
https://cran.r-project.org/doc/manuals/r-patched/R-admin.html#Installing-packages>BiocManager::install('FlowSOM')'getOption("repos")'replaces Bioconductor standard repositories,see'?repositories'fordetails replacement repositories:CRAN:https://cloud.r-project.org Bioconductor version3.14(BiocManager1.30...
Bioconductor version3.14(BiocManager1.30.16),R4.1.1(2021-08-10)Installingpackage(s)'HDCytoData'also installing the dependencies'Biostrings','KEGGREST','AnnotationDbi','AnnotationHub','GenomicRanges','DelayedArray','cytolib','ExperimentHub','SummarizedExperiment','flowCore'trying URL'https://bioconductor....
I tried running conda install -c bioconda bioconductor-deseq2 in a conda environment, but when I run R console and try to import DESeq2 I am getting the error message: Error: package or namespace load failed for ‘GenomeInfoDb’ in loadNamespace(i, c(li
R 安装包安装（install.packages）总是出错：Warning in install.packages : package"xxx"not available (for R version xxx）⽅法⼀：source("http://bioconductor.org/biocLite.R")biocLite("package_name")⽅法⼆：options(repos='http://cran.rstudio.com/')library(package_name)⽅法三：install....
CRAN: https://cran.rstudio.com/Bioconductor version 3.10 (BiocManager 1.30.16), R 3.6.0 (2019-04-26)Installing package(s) 'stringi'There is a binary version available but the source version is later:binary source needs_compilation stringi 1.6.1 1.6.2 TRUE ...
R 安装包安装(install.packages)总是出错: Warning in install.packages : package"xxx"not available (for R version xxx) 方法一: source("http://bioconductor.org/biocLite.R") biocLite("package_name") 方法二: options(repos='http://cran.rstudio.com/') ...
在利用R进行爬虫,时安装“rvest”包,时出现了错误,出现的错误提示如下:Warningininstall.packages: package ‘rvest’ is not available (forR version 3.5.3) Errorininstall.packages: error reading from bioconductor下R包的安装 这种方法不能用了 首先安装BiocManager if (!requireNamespace(“BiocManager”, q...
I have R version 3.5.1. After installing BiocManager, I tried to install bioconductor and I obtin the following error: BiocManager::install() Error: invalid version specification ‘Bioconductor version cannot be validated; no internet con...