R: update bioconductor stuff to 3.19 release Browse files Closes: https://trac.macports.org/ticket/69858Loading branch information barracuda156 authored and ryandesign committed May 7, 2024 1 parent f0f2a80 commit 459fffe Showing 134 changed files with 1,206 additions and 840 deletions. ...
source("http://bioconductor.org/biocLite.R") biocLite("limma") 有时候,没有出现上面这种情况,安装时也报错,我们要检查一下是source("http://bioconductor.org/biocLite.R")这里网址有没有错,如果检查完都没有错的话,我们可以是在http加多一个s试试,这样子: source("https://bioconductor.org/biocLite.R"...
Install or update Bioconductor and CRAN packagespkgs
比较常见的R包安装主要是4种: - 从`CRAN`安装, - 从`bioconductor`安装, - 从`github`安装, - 下载安装包`本地安装`。 随着学习的深入你还会遇见其他安装方法,我列举的这几种是最常见的。 R语言是老外发明的东西,我们**要访问老外的东西,由于众所周知的原因,是很困难的**。不只是R,其他的东西比如Python...
解决方法是通过bioconductor安装S4Vectors对应的版本。 rJava安装不上的bug update: 2020-05-17 这报错搞了我好久啊。。这可能又是一个mac独享的bug。一开始以为是Java的问题,但是后来发现是clang的问题。 因为我这是台刚启用没多久的mac,啥都还没安装。一开始安装rJava的时候提示没有安装Java,那就到Java官网下载...
> >>(https://community.rstudio.com/t/packages-are-not-updating/166214/3<https://community.rstudio.com/t/packages-are-not-updating/166214/3>), > >> [...] > > >> To sum it up: If I am updating packages (be it via > >> Bioconductor or CRAN) some packages simply don’t upda...
>BiocManager::install("stringi",ask = F,update = F)'getOption("repos")' replaces Bioconductor standard repositories, see '?repositories' for details replacement repositories: CRAN: https://cran.rstudio.com/Bioconductor version 3.10 (BiocManager 1.30.16), R 3.6.0 (2019-04-26)Installing package...
更新Bioconductor中的特定包到最新版本。需要首先更新R,其次更新Bioconductor,最终更新包。 1, First your should update your R version 12 sudo apt-get update sudo apt-get install r-base This will allow the latest Bioconductor to work compitablly. ...
Install or update Bioconductor and CRAN packagesRafael A. Irizarry
>BiocManager::install("stringi",ask = F,update = F)'getOption("repos")' replaces Bioconductor standard repositories, see '?repositories' for details replacement repositories: CRAN: https://cran.rstudio.com/Bioconductor version 3.10 (BiocManager 1.30.16), R 3.6.0 (2019-04-26)Installing package...