Nature Reviews Genetics volume 23, pages 395–410 (2022)Cite this article 24k Accesses 70 Citations 111 Altmetric Metrics details Abstract The development of single-cell and spatial transcriptomics methods was instrumental in the conception of the Human Cell Atlas initiative, which aims to generate ...
In this paper we present the design and analysis of the results from the competition Human Protein Atlas – Single-Cell Classification hosted on the Kaggle platform (https://www.kaggle.com/c/hpa-single-cell-image-classification). Given images, image-level labels and pretrained segmentation models...
The HPP Ab Resource Pillar, ostensibly led by the Human Protein Atlas (HPA; www.proteinatlas.org), was initiated in 2003 and uses Ab-based strategies to analyse spatio-temporal aspects of the proteome39. Linking the identification of proteins with ‘real-time’ localization at tissue, cell and...
Cite this article Madissoon, E., Oliver, A.J., Kleshchevnikov, V. et al. A spatially resolved atlas of the human lung characterizes a gland-associated immune niche. Nat Genet 55, 66–77 (2023). https://doi.org/10.1038/s41588-022-01243-4 Download citation Received26 July 2022 Accepted...
Cite this article Ouyang, W., Winsnes, C.F., Hjelmare, M.et al.Analysis of the Human Protein Atlas Image Classification competition.Nat Methods16, 1254–1261 (2019). https://doi.org/10.1038/s41592-019-0658-6 Download citation Received30 April 2019 ...
12 The Genotype-Tissue Expression Project (GTEx),13 and the Human Protein Atlas (HPA)5 has been recently published as two independent and comprehensive RNA-seq data sources on 30 human tissues. In HPA study, one of the major conclusion of the paper was that the largest fraction of the ...
Nature volume 558, pages 73–79 (2018)Cite this article 74k Accesses 590 Altmetric Metrics details Abstract Although plasma proteins have important roles in biological processes and are the direct targets of many drugs, the genetic factors that control inter-individual variation in plasma protein lev...
Experimental & Molecular Medicine volume 52, pages 1443–1451 (2020)Cite this article 8786 Accesses 19 Citations 16 Altmetric Metrics details Abstract In modern biology, the correct identification of cell types is required for the developmental study of tissues and organs and the production of ...
Scientific Reports volume 11, Article number: 190 (2021) Cite this article 2452 Accesses 6 Citations 1 Altmetric Metrics details Abstract Host–pathogen interaction is one of the most powerful determinants involved in coevolutionary processes covering a broad range of biological phenomena at molecular,...
“37”. Information on genes that were detected or not detected on RNA level in the SkM was extracted from the human protein atlas (http://proteinatlas.com). A list of genes detected in the SkM was obtained by concatenating the results from the search terms “tissue_specificity_rna:...