We put forward a novel compact 2-D graphical representation of proteins based on the concept of virtual genetic code and a four-color map. The novel graphical representation uniquely represents proteins and allows one to easily and quickly visually observe and inspect similarity/dissimilarity between ...
Liu N and Wang T 2007 Graphical representation for protein secondary structure sequences and their application Chem. Phys. Lett. 435 127Liu N,Wang T M.Graphical representations for protein secondary structure sequences and their application.Chinese Physics Letter. 2007...
RANDIC M,NOVIC M,TIKIC TOPIC D,et al.Novel numerical and graphical representation of DNA sequences and proteins. SAR andQSAR in Environmental Research . 2006RANDIC, M. - NOVIČ, M. - VIKIC-TOPIC, D. - PLACSIČ, D. Novel numerical and graphical representation of DNA sequences and ...
Furthermore, the numerical representation of DNA sequences also enables the application of digital signal processing techniques for analyzing genomic data; which is known as Genomic Signal Processing (GSP) [24]. Recently, the GSP field has attracted researchers’ interest, and its techniques are appl...
as the “milestones” of graphical bioinformatics. They are listed in Table1. We will elaborate on a few recent results in graphical bioinformatics, reported during the last two years, and appearing after the publication of the above-mentioned review on the graphical representation of proteins. ...
The original Edinburgh Pathway Notation (EPN) scheme [11] was designed to allow the logical depiction of signaling pathways. The basic objectives of the EPN were to create a notation scheme that was: a) flexible enough to allow the detailed representation of a diverse range of biological ...
The original Edinburgh Pathway Notation (EPN) scheme [11] was designed to allow the logical depiction of signaling pathways. The basic objectives of the EPN were to create a notation scheme that was: a) flexible enough to allow the detailed representation of a diverse range of biological ...
论文摘要:Subunit vaccines induce immunity to a pathogen by presenting a component of the pathogen and thus inherently limit the representation of pathogen peptides for cellular immunity based memory. We find that SARS-CoV-2 subunit peptides may not be robustly displayed by the Major Histocompatibilit...
105 proteins and 40 simple molecules, transcriptional regulation of 25 genes, and over 300 different reactions/ processes. Applicationof themodel is illustratedinthecontext of a study examining effects of the competitive aromatase inhibitor, fadrozole, on gene expression in gonad, brain, ...
produceGENEmapsproduce heatmaps of sequencing signal intensities along a meta-gene representation. produceGENEplotsproduce averaged smeta-plots of sequencing signal intensities along a normalized gene. producePEAKmapsproduce heatmaps of sequencing signal intensities centered in a list of peaks. ...