b=merge(a,tmp,by.x='GB_LIST',by.y='accession') head(b) d=toTable(org.Hs.egSYMBOL) f=merge(b,d,by='gene_id') head(f) 得到的结果如下: > head(f) gene_id GB_LIST ID symbol 1 1 W25099 338005 A1BG 2 10 NM_000015 118081 NAT2 3 100 NM_000022 494110 ADA 4 1000 NM_00179...
b=merge(a,tmp,by.x='GB_LIST',by.y='accession') head(b) d=toTable(org.Hs.egSYMBOL) f=merge(b,d,by='gene_id') head(f) 得到的结果如下: > head(f) gene_id GB_LIST ID symbol 1 1 W25099 338005 A1BG 2 10 NM_000015 118081 NAT2 3 100 NM_000022 494110 ADA 4 1000 NM_00179...
b=merge(a,tmp,by.x='GB_LIST',by.y='accession') head(b) d=toTable(org.Hs.egSYMBOL) f=merge(b,d,by='gene_id') head(f) 得到的结果如下: > head(f) gene_id GB_LIST ID symbol 1 1 W25099 338005 A1BG 2 10 NM_000015 118081 NAT2 3 100 NM_000022 494110 ADA 4 1000 NM_00179...
两个都会保留。RefSeq NM_xxxxxx和GenBank Afxxxxxx看起来是重复的,但RefSeq和GenBank是分开的数据库,而且两者都是可以通过在Entrez nucleotide中输入各自的ACCESSION获得。开始时临时的RefSeq记录与GenBank记录非常相似。但是,当RefSeq记录被专家review以后,新增的序列数据、生物学注解、和参考文献常被加入。那时,RefSeq条...
其规则如下:@gene(symbol) 限定其基因符号;@chr(num) 限定在第几号染色体;@lib(id) 限定其cDNA文库的Id号。(2)染色体浏览图谱定位的信息来源于孟德尔人类遗传学联机数据库、人类转录图谱和怀特海德基因组研究中心(Whitehead Institute Center for Genome Research)的物理图谱。点击某一染色体即可浏览该号染色体的...
b=merge(a,tmp,by.x='GB_LIST',by.y='accession')head(b)d=toTable(org.Hs.egSYMBOL)f=merge(b,d,by='gene_id')head(f) 得到的结果如下: 代码语言:javascript 复制 >head(f)gene_idGB_LISTIDsymbol11W25099338005A1BG210NM_000015118081NAT23100NM_000022494110ADA41000NM_001792490046CDH2510000U792713...
Entrez Gene reports provide links to all categories of RefSeq records. The Gene database can be queried with a RefSeq accession number in addition to text terms – see the Gene Help documentation for detailed query tips. E N T R E Z G E N O M E S Records representing completed genomes...
Gene name, GenBank and VectorBase accession number for each of the 8 nuclear Ixodes scapularis genes and the accession number for the 16S gene.Janice, Van ZeeJoseph, F. PiesmanAndrias, HojgaardWilliam, Cormack Black IV
monodon by differential display (DD) was found to have an open reading frame (ORF) encoding a 170 amino acid peptide with a C-type lectin-like domain (CTLD). The PmAV gene was expressed in Escherichia coli and the protein was purified. Recombinant PmAV protein displayed a strong antiviral...
Pharokka needs a refactor now that I am a much better coder than I was when I first wrote it, I just need to find some time! This bug seems to be caused by bad typing when parsing the gene prediction summary file. I can reproduce the error in v1.7.0 for scientific notation and in...