dict=/home/jianmingzeng/biosoft/GATK/resources/bundle/hg38/Homo_sapiens_assembly38.dict INDEX=/home/jianmingzeng/biosoft/GATK/resources/bundle/hg38/bwa_index/gatk_hg38 GATK=/home/jianmingzeng/biosoft/GATK/gatk-4.0.2.1/gatk GATK=/home/jianmingzeng/biosoft/GATK/gatk-4.0.3.0/gatk DBSNP=/home/jian...
module load java/1.8.0_91## wget https://github.com/broadinstitute/gatk/releases/download/4.0.3.0/gatk-4.0.3.0.zipGENOME=/home/jianmingzeng/biosoft/GATK/resources/bundle/hg38/Homo_sapiens_assembly38.fasta dict=/home/jianmingzeng/biosoft/GATK/resources/bundle/hg38/Homo_sapiens_assembly38.dictINDE...
dict=/home/jianmingzeng/biosoft/GATK/resources/bundle/hg38/Homo_sapiens_assembly38.dict INDEX=/home/jianmingzeng/biosoft/GATK/resources/bundle/hg38/bwa_index/gatk_hg38 GATK=/home/jianmingzeng/biosoft/GATK/gatk-4.0.2.1/gatk GATK=/home/jianmingzeng/biosoft/GATK/gatk-4.0.3.0/gatk DBSNP=/home/jian...