Tools to process and analyze deep sequencing data. - Merge pull request #1295 from deeptools/develop · deeptools/deepTools@c24522b
import os import numpy.testing as nt import pytest from hicexplorer.test.test_compute_function import compute ROOT = os.path.join(os.path.dirname(os.path.dirname(os.path.abspath(__file__))), "test_data/") sam_R1 = ROOT + "small_test_R1_unsorted.bam" sam_R2 = ROOT + "small_test...
# import a converter from bioconvert.fastq2fasta import FASTQ2FASTA # Instanciate with infile/outfile names convert = FASTQ2FASTA(infile, outfile) # the conversion itself: convert() Available Converters Setting up and maintaining Bioconvert has been possible thanks to users and contributors. Thanks...