-bash: fastqc: command not found $ fastqc-t3-o $qcdir $fqdir/SRR7722937_S1_L001_R2_001.fastq.gz-bash:fastqc:command not found(cellrangerze)root02:25:02/home/rstudio/data/raw/qc $ mamba install fastqc __ __ __ __/\/\/\/\/\/\/\/\ ███████████████//██...
本文介绍了如何使用oozie命令行的方式在yarn上运行spark任务，包括准备环境、上传jar包、配置job.properties...
FastqCLS is used from the command line. Please make sure to move the file to the same path as the command. The general compression command is: python3 cls.py (options) -i [input file] The general decompression command is: python3 cls_decomp.py (options) -i [input file] If you ...
on the command line then the program willrun with no user interaction required. In this mode it is suitable for inclusion into a standardised analysis pipeline. The options for the program as as follows: -h --help Print this help file and exit -v --version Print the version of the progr...
Currently, without editing any files, the only way to increase the amount of memory FastQC is able to use is by using multiple threads. However, we have thousands of samples we wish to run FastQC on, and we want to use 1 thread for each ...
The first and foremost reason why you might experience this error message is that of bad syntax in your code or you not following the exact format of the commands. Each command has a predefined format which you can see in its documentation. Several parameters are optional which others are man...