The generation and analysis of expressed sequence tags from Atta laevigata have provided important genetic basis for future studies on the biology of leaf-cutting ants and may contribute to the development of a more specific and environmentally friendly method for the control of agricultural pest leafc...
The greatest genetic differentiation was observed between H. fucus and the other four species, whereas H. arisanensis and H. formosanus presented the closest genetic relationship, which is consistent with the phylogenetic analysis based on cytb sequences....
A large set of genes was identified in the phytopathogenic fungus Botrytis cinerea by using an expressed sequence tag approach. The fungus was grown in axenic culture and a cDNA library was produced. From this library, 6559 ESTs were obtained. The combined sequences represent 3026 unisequences ...
expressed sequence tags , Mol. Ecol. Notes , 7 , 236–9.Borrone, J.W., Brown, J.S., Kuhn, D.N., Motamayor, J.C. and Schnell, R.J. (2007) Microsatellite Markers Developed from Theobroma cacao L. Expressed Sequence Tags. Molecular Ecology Notes, 7, 236-239. http://dx.doi.org...
(Expressed Sequence Tags) for lily with 52,172 contigs with an average length of 555 bp. The contigs together with singletons covered on average 37% of lily and 39% of tulip estimated transcriptome. Mining lily and tulip sequence data for SSRs (Simple Sequence Repeats) showed that di-...
Turbot marker sequences were also used as queries for analysis against the stickleback cDNA database, as the most informative model genome in this study (see Results). We wrote a BioPerl BLAST parser to extract the desired hits including sequence similarity figures and genome location information ...
Part of the book series: Lecture Notes in Electrical Engineering ((LNEE,volume 52)) 790 Accesses Abstract Clustering of expressed sequence tag (EST) plays an important role in gene analysis. Alignment-based sequence comparison is commonly used to measure the similarity between sequences, and rece...
An EST (expressed sequence tag) project of peanut, a part of the U.S. Peanut Genome Initiative supported by U.S. Industry and Peanut Growers, has been successfully initiated at Crop Protection and Management Research Unit, USDA-ARS, Tifton, GA, to develop genomic resource for peanut research...
Banana (Musa acuminata) is a crop contributing to global food security. Many varieties lack resistance to biotic stresses, due to sterility and narrow genetic background. The objective of this study was to develop an expressed sequence tag (EST) database of transcripts expressed during compatible ...
• The cDNA library was constructed using tissue from the inner bark ofC. sieboldiivar.sieboldii; 3 354 Expressed Sequence Tags (ESTs) were identified. We constructed 2 417 putative unigenes and assigned putative functions to 1 856 of them. Three hundred and fourteen microsatellites were found ...