The European Nucleotide Archive (ENA; http://www.ebi.ac.uk/ena) is Europe's primary nucleotide-sequence repository. The ENA consists of three main database... R Leinonen,R Akhtar,E Birney,... - 《Nucleic Acids Research》 被引量: 547发表: 2011年 European Nucleotide Archive The European...
Vadim Zalunin andGuy CochraneEuropean Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UKReceived September 15, 2010; Accepted October 3, 2010ABSTRACTThe European Nucleotide Archive (ENA; http://www.ebi.ac.uk/ena) is Europe’s primary nucleotide-sequence reposito...
frstEMBLnucleotide sequencedatabaselibrary,majoradvancesinsequencing andarchivingtechnologieshaveledtoabroadrangeo nucleotidesequencesthatbuildthecontento today’sEu- ropeanNucleotideArchive(ENA).Thespectrumextends romrawreadstoassembledandannotatedsequencesand relateddatatypes.Havingabroaduserprofle,theENA o ersboth...
Sequence Read Archive ( SRA ) Meta-data and data formats European Nucleotide Archive ( ENA )Leinonen, Rasko
the DNA Data Bank of Japan (DDBJ) at the National Institute for Genetics in Mishima, Japan; the European Nucleotide Archive (ENA) at the European Molecular Biology Laboratory's European Bioinformatics Institute (EMBL-EBI) in Hinxton, UK; and GenBank at National Center for Biotechnology Information...
European Nucleotide Archive. 2024 https://www.ebi.ac.uk/ena/browser/view/PRJEB70863. Wetzstein N, Diricks M, Anton TB, Andres S, Kuhns M, Kohl TA, Schwarz C, Lewin A, Kehrmann J, Kahl BC, Schmidt A, Zimmermann S, Jansson MK, Baron SA, Schulthess B, Hogardt M, Friesen I, ...
The complete BioMarks sequencing dataset is available at European Nucleotide Archive (EMBL-EBI) http://www.ebi.ac.uk/ena, under project accession number PRJEB9133. OTU tables, 18S metazoan database, MAME 1 group OTU table and phylogenetic trees data (alignments, sequences and trees) are ...
ENA upload tool This command line tool (CLI) allows easy submission of experimental data and respective metadata to the European Nucleotide Archive (ENA) using tabular files or one of the excel spreadsheets that can be found on thistemplate repo. The supported metadata that can be submitted inclu...
Data availability All annotation files have been deposited at https://doi.org/10.5281/zenodo.3555585 (last accessed April 6th 2020). The raw reads, as well as assembled sequences have been deposited in the European Nucleotide Archive (ENA) under the study accession PRJEB35865. References ...
Sequence reads for the 'Danish Scored Panel' of 182 Danish ash accessions (as described in ref. 3; sequence reads are available in the European Nucleotide Archive under the study accession number PRJEB10202) were mapped to a r eference composed of the complete set of CDS models (...