Towards in silico CLIP-seq: predicting protein-RNA interaction via sequence-to-signal learning Marc Horlacher Nils Wagner Annalisa Marsico Genome Biology (2023) SRSF2 is required for mRNA splicing during spermatogenesis Wen-Long Lei Zongchang Du Qing-Yuan Sun BMC Biology (2023) A fast non...
We generated 102 eCLIP experiments for 73 diverse RBPs in HepG2 and K562 cells (available athttps://www.encodeproject.org), demonstrating that eCLIP enables large-scale and robust profiling, with amplification and sample requirements similar to ChIP-seq. eCLIP enables integrative analysis of ...
CLIPdb: a CLIP-seq database for protein-RNA interactions. BMC Genomics. 2015;16:51. Article PubMed PubMed Central CAS Google Scholar Hu B, Yang YT, Huang Y, Zhu Y, Lu ZJ. POSTAR: a platform for exploring post-transcriptional regulation coordinated by RNA-binding proteins. Nucleic Acids...
We generated 102 eCLIP experiments for 73 diverse RBPs in HepG2 and K562 cells (available at https://www.encodeproject.org), demonstrating that eCLIP enables large-scale and robust profiling, with amplification and sample requirements similar to those of ChIP-seq. eCLIP enables integrative ...