CD-HIT Suite Summary: CD-HIT is a widely used program for clustering and comparing large biological sequence datasets. In order to further assist the CD-HIT users, we significantly improved this program with more functions and better accuracy, scalab... Y Huang,B Niu,Y Gao,... -...
Huang Y, Niu B, Gao Y, Fu L, Li W: CD-HIT Suite: a web server for clustering and comparing biological sequences. Bioinformatics 2010, 26(5):680-682.Huang, Y.; Niu, B.; Gao, Y.; Fu, L.; Li, W. CD-HIT Suite: A web server for clustering and comparing biological sequences....
suite of programs designed to quickly group sequences其他与 cd-hit 有关的软件包依赖 推荐 建议 enhanceslibc6 (>= 2.34) GNU C Library: Shared libraries libgcc-s1 (>= 3.3.1) GCC support library libgomp1 (>= 6) GCC OpenMP (GOMP) support library ...
crfsuite crlibm cronutils crunch cryptominisat csmith cspec cssc csv2json csvprintf ctapimkt ctemplate cubature cuneiform curlpp cutter cwc cyassl cygepoll cyphesis cyrillic czmq d0_blind_id d52 daala daemonize darkhttpd darkice darkstar darts datamash dbus-cxx dbus-test-runner ...
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网址:http://weizhong-lab.ucsd.edu/cdhit_suite/cgi-bin/ 三、算法说明 基本思路: 首先对所有序列按照其长度进行排序,然后从最长的序列开始,形成第一个序列类, 然后依次对序列进行处理,如果新的序列与已有的序列类的代表序列的相似性在cutoff以上则把该序列加到该序列类中,否则形成新的序列类。
CD-HIT Online Version ::DEVELOPER Group of Weizhong Li,Godzik Lab :: SCREENSHOTS N/A :: REQUIREMENTS Linux :: DOWNLOAD CD-HIT :: MORE INFORMATION Citation: Ying Huang, Beifang Niu, Ying Gao, Limin Fu and Weizhong Li. CD-HIT Suite: a web server for clustering and comparing biological seq...
CD-HIT Suite: a web server for clustering and comparing biological sequences. Summary: CD-HIT is a widely used program for clustering and comparing large biological sequence datasets. In order to further assist the CD-HIT users, we s... Ying,Huang,Beifang,... - 《Bioinformatics》 被引量:...