thaliana accessions, and their transcriptomes. When assessed on the basis of the reference annotation, one-third of protein-coding genes are predicted to be disrupted in at least one accession. However, re-annotation of each genome revealed that alternative gene models often restore coding potential...
In Arabidopsis thaliana, P4-ATPases constitute the largest subfamily of P-type ATPase pumps13. The catalytic a-subunit family consists of 12 members in A. thaliana, AminophosphoLipid ATPase1-12 (ALA1-12)13,14. A smaller family of b-subunits, ALA Interacting Subunits1-5 (ALIS1-5)15, ...
thaliana, we performed genome-wide scans for SNPs associated with local climate across all Eurasian non-relicts: we used the second principal component axis (PC2) from altitude and 19 bioclim variables from WorldClim23 because this PC axis separates the cold and wet northern from the hot and ...
The best reference locations for field research will have been well-established (>10 years old, but ideally much older) natural populations ofA. thaliana.In the British Isles for instance,A. thalianais predominantly a winter annual (flowering May–June) throughout, but it can occur as a summer...
历时7年花费7000万美元的拟南芥基因组计划(AGI,Arabidopsis Genome Initiative)由来自欧洲、日本和美国的研究人员合作完成 [1],此时距离1753年Carl Linnaeus为纪念首次描述这一植物的德国植物学家JohannesThal将其命名为Arabis thaliana已过去240年,而距离1943年Elliot Meyerowitz首次发现其具有作为模式生物的潜能仅过去50年 ...
Kumar Singh3 and Yogesh Mishra1* Abstract Background: S-domain receptor-like kinases (SD-RLKs) are an important and multi-gene subfamily of plant receptor-like/pelle kinases (RLKs), which are known to play a significant role in the development and immune responses of Arabidopsis thaliana. The...
Araport11_ a complete reannotation of the Arabidopsis thaliana reference genomeThe Plant journal _ for cell and molecular biology[2016]CY, Cheng, Va,of,A,the,The 文档格式: .pdf 文档大小: 1.38M 文档页数: 42页 顶/踩数: 0 / 0 收藏人数: 0 评论次数: 0 文档热度: 文档分类: 论文 --...
thaliana reference genome (TAIR10) using STAR (version 020201) (Dobin et al., 2013). Expression levels (FPKM [fragments per kilobase of transcript per million mapped reads]) of all annotated protein-coding genes and lncRNAs were estimated with RSEM (version 1.2.22) (Li and Dewey, 2011). ...
Arabidopsis thaliana is a model flowering plant widely used in plant genetics and molecular biology due to its small genome, ease of growth, and quick generation turnover, making it essential for studying basic plant biology. AI generated definition based on: Biotechnology (Second Edition), 2016 ...
Arabidopsis thaliana serves as a model species for investigating various aspects of plant biology. However, the contribution of genomic structural variations (SVs) and their associate genes to the local adaptation of this widely distribute species remain