chloroplastgenome sequencingThe complete nucleotide sequence of the chloroplast genome of Arabidopsis thaliana has been determined. The genome as a circular DNA composed of 154,478 bp containing a pair of inverted repeats of 26,264 bp, which are separated by small and large single copy regions of...
Here we report 10 sequences of chloroplast genome (cpDNA) encoded circRNAs (cp-circRNA) from 3-day-old Arabidopsis thaliana seedlings via next-generation sequencing. Their parental sequences were referred to as exonic, intronic, and intergenic gene sequences. Due to the very low level of cp-...
its nuclear genome size is estimated to be between 230 to 245 Mb, or one and a half times larger than that of theA.thaliana25,26.A.hallerissp.gemmifera(2n = 16) is a stoloniferous diploid
The thylakoid membrane of the chloroplast is the center of oxygenic photosynthesis. To better understand the function of the luminal compartment within the thylakoid network, we have carried out a systematic characterization of the luminal thylakoid proteins from the model organism Arabidopsis thaliana. ...
Genome 42, 887–892 (1999) CAS PubMed Google Scholar Mayer, K. Sequence level analysis of homologous segments of the genomes of rice and Arabidopsis thaliana. Genome Res. (submitted). Sato, S. Complete structure of the chloroplast genome of Arabidopsis thaliana. DNA Research 6, 283–290 (...
Arabidopsis thaliana is an important model system for the systematic study of a plant genome and its expression. A number of features of this plant make it particularly attractive to plant scientists including a high quality genome sequence, many available gene knockout lines, a short life cycle ...
We demonstrate that an activity-optimized version of the PB1 endonuclease, under the control of a heat-inducible promoter, is capable of targeting DNA breaks to an introduced PB1 recognition site in the genome of Arabidopsis thaliana. We further demonstrate that this engineered endonuclease can ...
Here we show that a random forest machine learning approach, which incorporates the 3D-shape of DNA, enhances binding prediction for all 216 tested Arabidopsis thaliana transcription factors and improves the resolution of differential binding by transcription factor family members which share the same ...
AtDPG1encodes a putatively chloroplast-localized protein that is highly conserved in various dicots BLAST searches of the completeArabidopsis thalianasequence revealed that only one copy of theAtDPG1gene is present in the nuclear genome and it encodes a 240-amino acid protein with an apparent molecu...
Isolated nucleotide compositions and sequences are provided for Arabidopsis thaliana genes. The nucleic acid compositions find use in identifying homologous or rel