The 3000 Rice Genomes Project (2014) The 3,000 rice genomes project . GigaScience 3 : 7.K RGP (2014) The 3,000 rice genomes project. GigaScience 3:7The 3,000 rice genomes project . GigaSci . 2014; 3 :7. BioMed Central Full TextLi, Z., et al. (2014). The 3,000 rice...
Improvement of cold tolerance at the booting stage (CTB) in rice is a key strategy for cultivation in high-altitude and high-latitude regions. Here, we identify CTB3 gene, encoding a calmodulin-binding transcriptional activator that positively regulates cold tolerance at the booting stage in japoni...
A variation of SOAPdenovo256 (version r240) with customized k-mers was used to assemble the rice genomes. A k-mer value was initially set for each accession according to a linear model ‘K=2*int (0.38*(sequencing depth) +10)+1’, which was trained from 50 randomly selected rice acce...
Wu B, Rice L, Shrimpton J, Lawless D, Walker K, Carter C, et al. Biallelic mutations in calcium release activated channel regulator 2A (CRACR2A) cause a primary immunodeficiency disorder. Elife 2021;10:e72559. Des Georges A, Clarke OB, Zalk R, Yuan Q, Condon KJ, Grassucci RA, et ...
5j, k; in Additional file 2: Table S9). As a representative of these PPI clusters, we illustrate the DS-specific PPIs, integrated by an SPR at RAB16C, among four YSK2 dehydrin genes (RAB16A–D, Fig. 5l–n) that play vital roles in rice drought resistance [6, 35]. The PPIs as ...
prok_rm=0 # forces MAKER to repeatmask prokaryotes (no reason to change this), 1 = yes, 0 = no #---Gene Prediction #if $abinitio_gene_prediction.snaphmm snaphmm=${abinitio_gene_prediction.snaphmm} # SNAP HMM file #else snaphmm= # SNAP HMM file #end if gmhmm= #...
The TCP transcription factor family has been identified in a diverse array of plants, but unlike other transcription factor families, such as MYB (V-myb avian myeloblastosis viral), WRKY (WRKY proteins contain one or two conserved WRKYGQK motifs at the N-terminus and a typical zinc-finger ...
Funding This work was supported by China Agriculture Research System of MOF and MARA (CARS-16), Construction Project of Southeast Observation Station for Jute and Kenaf of Ministry of Agriculture, China (K4215007A /KJG16001A), Plat- form Project of Germplasm Resources for Fiber Crops of ...
Cytosine, but not adenine, base editors induce genome-wide off-target mutations in rice Science, 364 (2019), pp. 292-295 CrossrefView in ScopusGoogle Scholar Kim et al., 2017 Y.B. Kim, A.C. Komor, J.M. Levy, M.S. Packer, K.T. Zhao, D.R. Liu Increasing the genome-targeting...
K. Precise editing of a target base in the rice genome using a modified CRISPR/Cas9 system. Mol. Plant 10, 523–525 (2017). Article CAS PubMed Google Scholar Rees, H. A. et al. Improving the DNA specificity and applicability of base editing through protein engineering and protein ...