Figure 4: Venn diagram showing the distribution of gene families betweenO. brachyantha,O. sativaandSorghum bicolor. Orthologous gene families are defined in Methods. The numbers of gene families and genes clustered in families are indicated for every species. The intersections between species indicate ...
we performed different cold acclimation treatments (0, 2, and 12 h under 4 ℃, abbreviated as CK (control), CA2, and CA12, respectively) on leaves. To reveal the specific features under these treatments, a Venn diagram was applied
Hypoxia is a severe challenge to an organism’s homeostatic equilibrium, affecting the physiological and pathological processes of organisms at high altitude1,2. The genetic mechanisms underlying long-term hypoxia adaptation have revealed positively selected genes and non-coding variants associated with car...
From the determination of the first complete genome sequence of an organism, the bacteriophage φX174 (Ref. 2), to the completion of 95% of the human genome sequence3,4, many technical advances in methodologies, automation and computing rapidly increased the rate at which DNA sequence was ...
For biological process, the highest categories were metabolic (8291 unigenes, 53.55%) followed by cellular process (7774, 50.21%) then single organism process (6181, 39.92%). In the category of molecular function, the most abundant groups included catalytic activity (6369, 41.14%) and binding ...
The choice of mutagen is dependent upon the organism’s DNA composition, DNA repair pathway efficiencies, and the chemical’s mutagenic signature. As a rule of thumb, EMS preferentially results in G/C base pair mutations whereas ENU has a bias toward A/T base pairs [21–23]. We previously...
influence of any mitochondrial dynamics can help study this connection between mitochondrial dynamics and body regeneration in planarians. To address this gap, we used the planarianSchmidtea mediterranea(S. med.) as a model organism to examine the role of mitochondrial dynamics, particularly ...
Introduction Hypoxia is a severe challenge to an organism’s homeostatic equilibrium, affecting the physiological and pathological processes of organisms at high altitude1,2. The genetic mechanisms underlying long-term hypoxia adaptation have revealed positively selected genes and non-coding variants associat...
Despite the use of Hymenolepis diminuta as a model organism in experimental parasitology, a full genome description has not yet been published. Here we present a hybrid de novo genome assembly based on complementary sequencing technologies and methods. T
Colobines, a group of Old World monkeys, serve as an important model organism for studying the evolution of the primate diet because of their adaptation to folivory: they pri- marily eat leaves and seeds rather than fruits and insects as their major food source. In their specialized and ...