web based gene set analysis Web-based Gene Set Analysis Toolkit,全称为WEB-based Gene SeT AnaLysis Toolkit,是一个基于网页的基因集的分析工具。它根据三种富集分析的算法,分成三个功能。©2022 Baidu |由 百度智能云 提供计算服务 | 使用百度前必读 | 文库协议 | 网站地图 | 百度营销 ...
今天给大家推荐个软件,WebSestalPS:如果会R语言,当然还是首推clusterprofiler的,毕竟业界公认的好呀。 WebSestalt简介 WebSestalt 全称为WEB-based Gene SeT AnaLysis Toolkit。翻译过来也就是,基于网页的基因集的分析工具。由于基于网页嘛,所以就会很简单的入手。从这个数据库的更新来看,这个数据库有13,17,19版本,所...
对Trans-protein的pathway analysis,点击蓝色的GSEA 就会在这个网上运行WebGestalt (WEB-based GEne SeT AnaLysis Toolkit): 它也可以跑reactome,只要选择pathway-->reactome就可以了,它的好处是可以给有一列是数值,而不是完全的gene list LinkedOmics 更raw一些,里面有TCGA和CPTAC的数据 Drug Screening Depmap 右上角Do...
WebSestalt 全称为WEB-based Gene SeT AnaLysis Toolkit。翻译过来也就是,基于网页的基因集的分析工具。由于基于网页嘛,所以就会很简单的入手。从这个数据库的更新来看,这个数据库有13,17,19版本,所以还是在一直更新的,结果的质量还是有一定保证的。这样对于不会编程的人而言,也是可以很容易上手的。 根据我们之前介...
Many software tools have been developed for this analysis, including our previously published Web-based Gene Set Enrichment Analysis Toolkit (WebGestalt) [ 1 ]. Major differences among existing tools include: 1) the statistical test used for the enrichment analysis; 2) supported organisms; 3) ...
WebGestalt2: an updated and expanded version of the Web-based Gene Set Analysis Toolkit Background Functional enrichment analysis has become a popular approach for the interpretation of gene lists derived from large scale genomic, transcriptom... D Duncan,N Prodduturi,B Zhang - 《Bmc ...
Webgestalt:WEB-basedGEneSeTAnaLysis Toolkit 一个在不同生物学背景下探索基因集的整合系统。 基因集是指具有遗传特性的基因编码的集合 Webgestalt由四个模块组成:基因集管理(genesetmanagement),信息检索(information retrieval),组织/可视化(organization/visualization),统计学(statistics) ...
Vector Graphic toolkit of genome Synteny and Collinearity (VGSC) is a new web-based interface for synteny and collinearity representation. Its software architecture is shown in Figure1, in which the command-line toolkits and web-based service are both illustrated. The workflow of plotting remains ...
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GeneWeb - Genealogy software. It comes with a Web interface and can be used off-line or as a Web service. (Demo, Source Code) GPL-2.0 OCaml Gramps Web - Web app for collaborative genealogy, based on and interoperable with Gramps, the open source genealogy desktop application. (Demo, Sour...