Transcriptome and metabolome analysis revealed the dynamic change of bioactive compounds of Fructus Ligustri LucidiFRUIT developmentHIGH performance liquid chromatographyBIOACTIVE compoundsTRANSCRIPTOMESBackground: The Fructus Ligustri Lucidi, the fruit of Ligustrum lucidum, contains a variety of bioactive compounds...
To address this knowledge gap, we conducted an in-depth transcriptomic analysis of developing sorghum seeds, dissecting the early whole seed, embryo, and endosperm tissues from fertilization through maturity. Complementing these efforts, metabolomic analyses were performed at five key seed developmental st...
A total of 771 metabolites were identified in the metabolome analysis using fig female flower tissue. Of these, 88 metabolites (including one carbohydrate, eight organic acids, seven amino acids, and two vitamins) showed significant differences in fruit tissue before and after bagging. Changes in ...
Corpus luteum cysts are a serious reproductive disorder that affects the reproductive performance of sows. In this study, transcriptome and metabolome datasets of porcine normal and cyst luteal granulosa cells were generated to explore the molecular mechanism of luteal cyst formation. We obtained 28.9 ...
Therefore, integrated transcriptome and metabolome analysis can offer a unique approach for better understanding of plants in responses to pathogen infection. Phytophthora capsici, as a hemi-biotrophic pathogen, can infect and grow initially as biotrophs but later switch to a necrotrophic phase [35]....
Metabolome analysis of pepper leaves after different light treatments To better understand the process of leaf color change in pepper, liquid chromatography tandem mass spectrometry (LC-MS/MS) was used to analyze anthocyanin metabolites in pepper leaves in each treatment group, and 108 anthocyanin comp...
We computed the mass spectrum peak area integrals of all samples and performed integral quality control by monitoring the changes in the mixtures of the extracted samples. 2.3. Metabolome analysis The metabolomic analysis was performed using the MetaboAnalystR (1.01) package in R (Jiang et al., ...
Spatiotemporal transcriptome and metabolome landscapes of cotton somatic embryos Xiaoyang Ge Xiaole Yu Fuguang Li Nature Communications (2025) Proteomics Studies Indicate Differential Regulation of Key Metabolism, Energy, and Stress-Responsive Proteins in Azadirachta indica Callus Upon Exposure to Salinity ...
A transcriptomic study identified ‘NH4+-specific’ and ‘NO3−-specific’ gene sets in A. thaliana in response to the short-term treatments of NH4+ and NO3−, and further analysis indicated that the ‘NH4+-specific’ genes are mainly involved in cytokinin response and reductant generation ...
the regulatory mechanism of flavonoid biosynthesis inRhododendron pulchrumremains unknown. The transcriptome and metabolome analysis ofRhododendron pulchrumwith white, pink and purple color in this study aimed to reveal the mechanism of flavonoid biosynthesis and to provide insight for improving the petal co...