Expression and gene transcript of Fc receptors for IgG, HLA class II antigens and Langerhans cells in human cervico-vaginal epithelium. 1992. Expression and gene transcript of Fc receptors for IgG, HLA class II antigens and Langerhans cells in human cervico-vaginal epithelium. Clin. Exp... LA...
(1999). Gene expression analysis by transcript profiling coupled to a gene database query. Nature Biotech 17:798-803.Shimkets RA, Lowe DG, Tai JT, et al. Gene Expres- sion analysis by transcript profiling coupled to a gene database query. Nat Biotechnol. 1999;17:798-803....
Expression Atlas (http://www.ebi.ac.uk/gxa) is a value-added database providing information about gene, protein and splice variant expression in different cell types, organism parts, developmental stages, diseases and other biological and experimental conditions. The database consists of selected ...
Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks Cole Trapnell 1,2 , Adam Roberts 3 , Loyal Goff 1,2,4 , Geo Pertea 5,6 , Daehwan Kim 5,7 , David R Kelley 1,2 , Harold Pimentel 3 , Steven L Salzberg 5,6 , John L Rinn 1,...
Recent advances in high-throughput cDNA sequencing (RNA-seq) can reveal new genes and splice variants and quantify expression genome-wide in a single assay. The volume and complexity of data from RNA-seq experiments necessitate scalable, fast and mathema
We used digital gene expression (DGE) technology to identify differentially-expressed genes (DEGs) between two lotus cultivars with different alkaloid contents at four leaf development stages. We also predicted potential genes involved in aporphine alkaloid biosynthesis by weighted gene co-expression ...
Importantly, the identified widespread natural antisense transcripts (NATs) and hundreds of the NAT-eQTL regulating the expression of NATs further increase the complexity of gene expression. These observations and conclusions enhance our understanding of various fundamental biology questions. For example, ...
After the completion of the genomic sequence of Arabidopsis thaliana, it is now a priority to identify all the genes, their patterns of expression and functions. Transcript profiling is playing a substantial role in annotating and determining gene functi
We describe here a simple classifier that reliably discriminates between binary phenotypic states with just two gene expression measurements. Rather than summing cumulative expression across many genes, we employ an algorithm which compares the relative expression of all possible pairs of genes in a ...
The most advan- tage of the microarray platform in global analysis of gene expression is the speed of data aquisition, but the gene with low level of expression would not be discriminated from that of no expression. SAGE is a high throughput sequencing based tech- nique used to estimate the...