The Protein Information Resource (PIR) is an integrated public resource of protein informatics that supports genomic and proteomic research and scientific discovery. PIR maintains the Protein Sequence Database (PSD), an annotated protein database containing over 283 000 sequences covering the entire ...
The Protein Journal is a comprehensive resource, publishing original research on all aspects of protein structure and function. Explores areas such as ...
Users can search interested proteins on ProteomicsDB to explore the protein information and integrated expressions("Integrated expressions" 指的是将来自不同来源或不同实验的数据整合在一起,并对它们的表达进行综合分析或比较。在蛋白质组学中,这可能涉及整合来自不同组织、条件或实验的蛋白质表达数据,以便对其...
Y. et al. dbPTM 2016: 10-year anniversary of a resource for post-translational modification of proteins. Nucleic Acids Res 44, D435–D446, doi:10.1093/nar/gkv1240 (2016). 63. Wu, C. H. et al. PIRSF: family classification system at the Protein Information Resource. Nucleic Acids Res ...
Step 1: Download the ProteinNPT data files curl -o ProteinNPT_data.zip https://marks.hms.harvard.edu/ProteinNPT/ProteinNPT_data.zip unzip ProteinNPT_data.zip && rm ProteinNPT_data.zip We recommend saving this file in a location where disk space is not a concern. The above file will ...
Abstract The Pfam database is a widely used resource for classifying protein sequences into families and domains. Since Pfam was last described in this journal, over 350 new families have been added in Pfam 33.1 and numerous improvements have been mad
Each of the 125 PPI resource was then queried with a gene/protein identifier for testing its functionality, and the resources belonging to the following types were excluded from further consideration for the detailed analysis: (i) those which were not functional (35 resources), (ii) protein ...
To confirm whether Amuc_1409 is identified as an extracellular protein inA. muciniphilacultured under different growth conditions, we carried out a proteomic analysis of the secretome ofA. muciniphilagrown in brain-heart infusion (BHI) medium. In total, 38 unique peptides corresponding to 22 pr...
Pigeonpea (Cajanus cajan (L.) Millsp) is one of the major grain legume crops of the tropics and subtropics, but biotic stresses [Fusarium wilt (FW), sterility mosaic disease (SMD), etc.] are serious challenges for sustainable crop production. Modern geno
A guide to the Human Protein Atlas Updated: 21 October 2019 09:23 Sitting at the lab desk in the late hour of my day, I navigate the web scrolling pages and pages of content to find the information I need to plan my next experiment: which tissue is my protein expressed in? I ...