The Protein Data Bank is an international repository for results of macromolecular structural studies. Two classes of information are included in the Data Bank: atomic coordinates and structure factor data. Almost all of this information is unpublished and is not available elsewhere. Bibliographic ...
Introduction Determining Biomolecule Structures The Protein Databank The PDB Data-file Formats Accessing Data in PDB Entries Accessing PDB Annotation Data Contact Maps STRIDE: Secondary Structure Assignment Assigning Secondary Structures Introducing the mmCIF Protein Format Where to from Here The Maxims ...
Open access to 3D structure information from the Protein Data Bank (PDB) facilitated discovery and development of >90% of the 79 new antineoplastic agents (54 small molecules, 25 biologics) with known molecular targets approved by the FDA 2010–2018. Analyses of PDB holdings, the scientific lite...
The Protein Data Bank (PDB)––the single global repository of experimentally determined 3D structures of biological macromolecules and their complexes––was established in 1971, becoming the first open-access digital resource in the biological sciences. The PDB archive currently houses ~130,000 entrie...
The Protein Data Bank [PDB; Berman, Westbrook et al. (2000), Nucleic Acids Res.28, 235–242; http://www.pdb.org/] is the single worldwide archive of primary structural data of biological macromolecules. Many secondary sources of information are derived from PDB data. It is the starting ...
The protein data bank_专业资料。1 Research Collaboratory for Structural Bioinformatics (RCSB), 2 Department of Chemistry, Rutgers University,? 2000 Oxford University Press Nucleic Acids Research, 2000, Vol. 28, No. 1 235–242 The Protein Data Bank Helen M. Berman1,2,*, John Westbrook1,2, ...
The most cited RCSB PDB publication, "The Protein Data Bank" by Berman et al.5, appeared in Nucleic Acids Research (NAR) in 2000. This inaugural article described the mission and vision of the resource and its operations, and provided data deposition and download instructions11. Berman et al...
The Protein Data Bank is a computer-based archival file for macromolecular structures. The Bank stores in a uniform format atomic co-ordinates and partial bond connectivities, as derived from crystallographic studies. Text included in each data entry gives pertinent information for the structure at ...
The Protein Data Bank and meShigeyuki YokoyamaNature Structural & Molecular Biology
The Protein Data Bank (PDB) is an archive of experimentally determined three-dimensional structures of proteins, nucleic acids, and other biological macromolecules with a 25 year history of service to a global community. PDB is being replaced by 3DB, the Three-Dimensional Database of Biomolecular ...