The DNA Data Bank of Japan (DDBJ; http://www.ddbj.nig.ac.jp) maintains and provides archival, retrieval and analytical resources for biological information. The central DDBJ resource consists of public, open-access nucleotide sequence databases including raw sequence reads, assembly information and ...
DDBJ trace archiveNext-generation sequencing platformThe Center for Information Biology and DNA Data Bank of Japan (CIB-DDBJ) has operated biological databases since 1987 in collaboration with NCBI and EBI. As one of the three major public databases,......
The DNA Data Bank of Japan Center (DDBJ Center; http://www.ddbj.nig.ac.jp) maintains and provides public archival, retrieval and analytical services for biological information. Since October 2013, DDBJ Center has operated the Japanese Genotype-phenotype Archive (JGA) in collaboration with our par...
The Cephalotus genome assembly and gene models are available from the DNA Data Bank of Japan (DDBJ) with the accession numbers BDDD01000001 to BDDD01016307. The genomic sequences, gene models and other source data are also available at CoGe (Genome ID = 29002) and Dryad (doi:10.5061...
DDBJ: DNA Data Bank of Japan GenBankcontains all annotated and identified DNA sequence information SRA: Short Read Archivecontains measurements from high throughput sequencing experiments UniProt: Universal Protein Resourceis the most authoritative repository of protein sequence data. ...
The yak whole-genome shotgun project has been deposited at the DNA Data Bank of Japan (DDBJ), the European Molecular Biology Laboratory (EMBL) nucleotide sequencing database andGenBankunder the same accession,AGSK00000000. The version of the genome described in this paper is the first version,...
Google Scholar DNA Data Bank of Japan. [http://www.ddbj.nig.ac.jp/index-j.html] Download references Acknowledgements We thank Dr. Yasukazu Nakamura at Kazusa DNA Research Institute for helpful advice on the annotation of the cp genome, and Dr. Shohab Youssefian at Akita Prefectural Universit...
(hatps1, accession number AB827276),H. albus Hyoscyamuspremnaspirodiene oxygenase 1 (hahpo1, accession number AB827277), andH. albus wrkytranscription factor 1 (hawrky1, accession number AB827275) were deposited inDNA Data Bank of Japan(DDBJ). A list of primers used for these experiments ...
Data availability The sequence reads are available in the DNA Data Bank of Japan Sequence Read Archive under accession number DRA009132, [https://trace.ddbj.nig.ac.jp/DRASearch/submission?acc=DRA009132].
The quality of the scaffolds was evaluated by mapping onto the genome of 17,181 mRNA sequences from a wide variety of R. sativus cultivars (Supplementary Tables S1 and S2). The scaffolds and contigs were deposited at the DDBJ (DNA Data Bank of Japan) under accession numbers DF196826–DF...