conda create -n tgsgapcloser | conda acitvate tgsgapcloser #先安装依赖包minimap2 conda install -c bioconda minimap2 #安装tgsgapcloser conda install -c bioconda tgsgapcloser #测试,显示manual即为安装成功 tgsgapcloser -h 二、查
TGS-gapcloser 是华大基因开发的,一个利用其他组装或是长度长测序数据对草图进行gap填充的一款软件。 基因组组装过程中会得到草图的scaffold,需要进一步进行gaps的关闭。TGS-gapcloser 是华大基因开发的,一个利用其他组装或是长度长测序数据对草图进行gap填充的一款软件。 1. 安装 下载 git clone https://github.com/B...
TGS-GapCloserHP高性能基因组组装补洞软件是由青岛华大基因研究院著作的软件著作,该软件著作登记号为:2024SR1078126,属于分类,想要查询更多关于TGS-GapCloserHP高性能基因组组装补洞软件著作的著作权信息就到天眼查官网!
If this PR adds or updates a recipe, use "Add" or "Update" appropriately as the first word in its title. New recipes not directly relevant to the biological sciences need to be submitted to theconda-forge channelinstead of Bioconda. PRs require reviews prior to being merged. Once your PR...
TGS-GapCloser: a fast and accurate gap closer for large genomes with low coverage of error-prone long reads | Welcome to Oxford Nanopore technologies. Our goal is to enable the analysis of any living thing, by any person, in any environment
If you use TGS-GapCloser in your work, please cite: TGS-GapCloser: A fast and accurate gap closer for large genomes with low coverage of error-prone long reads Mengyang Xu, Lidong Guo, Shengqiang Gu, Ou Wang, Rui Zhang, Brock A Peters, Guangyi Fan, Xin Liu, Xun Xu, Li Deng, Yongwe...
TGS-GapCloser also shows its power to fill gaps for the ultra-large genome assembly of ginkgo (~12 Gb), with 71.6% of gaps closed. The validation of inserted or merged gap sequences was conducted with NGS reads and reference genomes, respectively. The updated genome assemblies may...